Gene VC0395_A1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1858 
SymbolribH 
ID5137914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp1976121 
End bp1976642 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content47% 
IMG OID640533315 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_001217782 
Protein GI147675653 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0378716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTAGAAT CCGGCGATTC TCACTTGATG AACAGAGTTA AAGGAAAGCT TATGAAAGTG 
ATCGAGGGTG GTTTCCCAGC ACCAAATGCG AAAATTGCGA TTGTGATTTC TCGTTTCAAC 
AGTTTTATCA ATGAAAGTTT GCTGTCTGGT GCCATCGATA CTCTTAAGCG TCACGGTCAG 
ATCAGTGATG ACAACATTAC CGTTGTGCGT TGTCCCGGTG CGGTTGAGCT GCCTCTGGTA 
GCGCAACGTG TTGCAAAAAC CGGCGACTAC GATGCGATTG TCTCTCTGGG TTGTGTGATC 
CGTGGCGGTA CACCGCACTT TGACTACGTT TGCAGTGAAA TGAATAAAGG TCTGGCACAA 
GTGTCTCTGG AATTTAGCAT TCCAGTCGCA TTCGGTGTGT TGACTGTTGA TACTATCGAT 
CAAGCTATTG AACGCGCAGG AACCAAGGCT GGTAATAAGG GTGCTGAAGC AGCACTGAGC 
GCACTTGAGA TGATTAATGT TCTTTCTGAA ATCGATTCCT AA
 
Protein sequence
MLESGDSHLM NRVKGKLMKV IEGGFPAPNA KIAIVISRFN SFINESLLSG AIDTLKRHGQ 
ISDDNITVVR CPGAVELPLV AQRVAKTGDY DAIVSLGCVI RGGTPHFDYV CSEMNKGLAQ 
VSLEFSIPVA FGVLTVDTID QAIERAGTKA GNKGAEAALS ALEMINVLSE IDS