| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1851 |
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| Symbol | rpsB |
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| ID | 5137319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1968734 |
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| End bp | 1969462 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533308 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_001217775 |
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| Protein GI | 147673418 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000000165959 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATCTG TATCAATGCG CGATATGCTG ACAGCGGGCG TACACTTCGG TCACCAAACT
CGTTACTGGA ACCCAAAAAT GAAGCAATTC ATTTTCGGCG CACGTAACCG CGTTCACATC
ATCAACCTAG AAAAAACTGT ACCTATGTTC AACGAAGCTC TAGCTGAGCT GGCAAAAGTT
GGCGAGAAGA AAGGTAAAGT TCTATTCGTT GGTACTAAGC GCGCTGCATC TGAGTCTGTG
AAAGAAGCAG CTCTAGCAAG CAACCAATAC TACGTTAACA ACCGCTGGTT GGGCGGTATG
CTGACTAACT GGAAAACTGT TCGTCAGTCA ATCAAGCGTC TGAAAGAGCT GGAAGTTCAA
TCTACTGACG GTACTTTTGA CAAGCTGACT AAGAAAGAAG CTCTAATGCG CACTCGCGAA
ATGGAGAAAC TGGAAAAGTC TCTTGGCGGT ATCAAAGATA TGGGCGGCCT GCCTGACGCT
CTGTTCGTAA TCGACGCAGA TCACGAGCAC ATCGCTATCA AAGAAGCGAA CAACCTAGGT
ATTCCAGTAT TTGCTGTTGT TGATACTAAC TCTAGCCCAG ACGGCGTAGA CTACATCATC
CCAGGTAACG ACGACGCGAT CCGCGCTGTT CAACTGTACC TGAATGCTGC TGCTCAAGCG
ATCAACGAAG GTCGTAACAA AGACGTAGCT GCTGTAGCTG AAAAAGACGG TTTCGTAGAA
GCGGAATAA
|
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| Protein sequence | MASVSMRDML TAGVHFGHQT RYWNPKMKQF IFGARNRVHI INLEKTVPMF NEALAELAKV
GEKKGKVLFV GTKRAASESV KEAALASNQY YVNNRWLGGM LTNWKTVRQS IKRLKELEVQ
STDGTFDKLT KKEALMRTRE MEKLEKSLGG IKDMGGLPDA LFVIDADHEH IAIKEANNLG
IPVFAVVDTN SSPDGVDYII PGNDDAIRAV QLYLNAAAQA INEGRNKDVA AVAEKDGFVE
AE
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