Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1847 |
Symbol | uppS |
ID | 5137121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1965386 |
End bp | 1966156 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640533304 |
Product | undecaprenyl diphosphate synthase |
Protein accession | YP_001217771 |
Protein GI | 147675134 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000092739 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTCGTTG TGTTTCTTAT GCAAAATCTA TCTCTTTCCC AAGATGTATT GCCTAAACAT ATTGCCGTCA TTATGGATGG TAATGGTCGT TGGGCGAAAG CGCAGGGAAA ACCGCGTGTT TTCGGCCATA AAAATGGTGT GGCTGCGGTA CGAAAAACCA TCTCTACTTC TGCTCGCCTT GGCATTAAAG CCGTAACTCT GTTTGCTTTT AGCAGCGAGA ACTGGCGTCG TCCGGAAGAA GAAGTGGGCG TGTTGATGGA ACTTTTTATG ACGGTTCTTT CAACCGAAAT TAAGAAATTG CATAAAAACA ATCTGCGTTT GCGAGTGATC GGTGATAAAA GCCGCTTTAG TGAGCGTCTG CAAACGAAAA TCGCGCAAGC GGAGCAGTTA ACCGCCAGCA ATACCGGCAT GGTGGTCAAC ATCGCTGCGA ACTACGGTGG ACAGTGGGAT ATCTTGCAAG CTACTCAAGC ATTGGCTGAA AAGGTTACCC AAGGTGAACT GCAACCGTCG GACATCGATG AAGACGTATT TAAGCAGCAT TTGACTATGG CTGATCTGCC GGATGTGGAT TTGTTGATCC GCACCAGTGG AGAGTGCCGC ATTAGTAATT TTATGCTTTG GCAACTTGCC TATGCAGAAA TGTATTTCAC TCCAGTCTTC TGGCCTGAGT TCGATGAAAA CTGCCTGATT GAAGCAGTGA CTTGGTTTGT TAATCGTGAG CGCCGTTTTG GCTGTACTGG TGAACAAGTC AAGGCATTGA TGGAAAACTG A
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Protein sequence | MFVVFLMQNL SLSQDVLPKH IAVIMDGNGR WAKAQGKPRV FGHKNGVAAV RKTISTSARL GIKAVTLFAF SSENWRRPEE EVGVLMELFM TVLSTEIKKL HKNNLRLRVI GDKSRFSERL QTKIAQAEQL TASNTGMVVN IAANYGGQWD ILQATQALAE KVTQGELQPS DIDEDVFKQH LTMADLPDVD LLIRTSGECR ISNFMLWQLA YAEMYFTPVF WPEFDENCLI EAVTWFVNRE RRFGCTGEQV KALMEN
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