| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1842 |
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| Symbol | ompH |
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| ID | 5137469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1958930 |
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| End bp | 1959439 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640533299 |
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| Product | outer membrane protein OmpH |
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| Protein accession | YP_001217766 |
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| Protein GI | 147674756 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2825] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00348927 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAACA TGATCAAAGC AGCCAGCCTT GGCCTGATTA TTCTTAGCTC ATCAATGATG
GCGAATGCGG CTGAAGCAGC GCAGAAAATT GGCTACATCA ACACTGCGCA AGTGTTCCAA
GCGCTGCCGC AACGTGAAGT CGTTTTGCAA AAGATGCAAG AAGAGTTCAA AGACAAAGCG
GCTGAGCTGC AAGCTATCCA AGCGGATGCT AAAACCAAGA TTGAGAAGCT CAAGCGTGAT
GGTCAATTGA TGGGACAAGA TGAAGTAGAG AAACTGCGCA TCGAAATCGG TCAATTGGAC
AGCAAATACA AGATCAAAGC ACAAGCGTTA GAGCAAGCGT CTGCTCGTCG TGAAGCCGAA
GAGAAGCAAA AACTGTTTAA AGTGATCCAA GATGCAGTGA AGAAAGTGGC TGAGAAAGAA
GGCTACGATA TCGTGCTAGA CACGAGCTCA ATGCAATACG GTAAGCCAGA ACACAATCTG
TCTGAGAAAG TTATTAAAGC CATTAAATAA
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| Protein sequence | MKNMIKAASL GLIILSSSMM ANAAEAAQKI GYINTAQVFQ ALPQREVVLQ KMQEEFKDKA
AELQAIQADA KTKIEKLKRD GQLMGQDEVE KLRIEIGQLD SKYKIKAQAL EQASARREAE
EKQKLFKVIQ DAVKKVAEKE GYDIVLDTSS MQYGKPEHNL SEKVIKAIK
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