Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1841 |
Symbol | lpxD |
ID | 5135143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1957865 |
End bp | 1958920 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640533298 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_001217765 |
Protein GI | 147675586 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0291196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAC TCACTTTAGC CGAATTGGCT ACTATCACCG GGGGGGAGTT GTTCGGTGAT CCAACAGCAC TGGTCAGTGC CGTTGCGCCT ATGGATAAGG CACAGCTTGG ACATGTGACA TTCTTGTCTA ATCCTAAATA CAGTAAGCAC TTAGGTGATT GTAAAGCCAC GGTGATCATG GTGAAAACCA GTGAGCGAGA ACTCTGTCCG AGTAACGCTC TGGTGGTTGC CGATCCGTAT GTTGCATTTG CTAAAGTGGC TCAGGCGCTG GATTCAACTC CTTCTCCTGC ACACGGTATT GCACCGAGTG CTGTGATTGC TGAAGATGCA AAGTTAGGTC ACAACGTTTC GATTGGGGCA AATGCGGTCA TTGAGTCAGG TGTTCAGCTT GGCGATAACG TAGTGATTGG TGCTGGCTGT TTTATCGGTA AACAAGCGCG TTTGGGCGAT AACACTAAGC TTTGGGCCAA TGTAACGATT TACCACAAAG TGGAAATCGG CTCAGATTGT TTGATTCAAT CTGGAACCGT GATTGGTGCT GATGGCTTTG GCTATGCGAA TGAGCGTGGC GAGTGGATTA AAATTCCTCA GCTTGGCTCT GTGCGTATTG GTGATCGCGT TGAGATTGGT GCTTGCACCA CCATCGACCG CGGCGCGCTG GATGATACGG TGATTGAAGA TAACGTGATC ATCGATAATC AGCTGCAAAT CGCTCACAAC GTGCACATCG GATATGGTAG TGCGCTGGCG GGTGGTACAG TAATCGCCGG CAGTACACGC ATTGGCAAGT ACTGTATTAT TGGTGGCGCT AGCGTGATTA ACGGACATAT CGAAATTGCC GATGGGGTGA CCATCACTGG CATGGGTATG GTGATGCGCA GTATTGAGGA GAAGGGGATG TACTCTTCGG GTATTCCTCT GCAAACCAAT AAAGAGTGGC GTAAAACGGC CGCTCGCGTA CACCGTATTG ACGATATGCA TAAGCGACTG AAAGCTTTAG AAAAGTTGCT TGAGCAATCC GACACGGTAC AGCCCGATAA CTCTCAAGCT GAATAA
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Protein sequence | MTTLTLAELA TITGGELFGD PTALVSAVAP MDKAQLGHVT FLSNPKYSKH LGDCKATVIM VKTSERELCP SNALVVADPY VAFAKVAQAL DSTPSPAHGI APSAVIAEDA KLGHNVSIGA NAVIESGVQL GDNVVIGAGC FIGKQARLGD NTKLWANVTI YHKVEIGSDC LIQSGTVIGA DGFGYANERG EWIKIPQLGS VRIGDRVEIG ACTTIDRGAL DDTVIEDNVI IDNQLQIAHN VHIGYGSALA GGTVIAGSTR IGKYCIIGGA SVINGHIEIA DGVTITGMGM VMRSIEEKGM YSSGIPLQTN KEWRKTAARV HRIDDMHKRL KALEKLLEQS DTVQPDNSQA E
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