Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1834 |
Symbol | tilS |
ID | 5135612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1948599 |
End bp | 1949921 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640533291 |
Product | tRNA(Ile)-lysidine synthetase |
Protein accession | YP_001217758 |
Protein GI | 147674336 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain [TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGATC TCTATCTCCA CTTTGTGCAG CAATTAGCTC GCTATCCTTT TCGCAAAATC CTTCTCGCAC TGAGCGGCGG CGTGGATTCG CAAGTTCTGC TTGCCCTTCT GGCGCGTGGA CGCGATGAGT TTGGTTGGGA TGTGACCGCG GTTCATGTTC ATCATGGGTT GAGCCCGAAT GCCGATCAGT GGGCGCAGCA TTGCCAGCGC TGTTGCCGTG AAGTCGGCAT GGCCTGTCAA ATCGAATATG TACAGCTGGA TGTGGCAAGT GGTGAAAGTA TTGAGAAACT GGCGCGAGAG GCGCGTTATC GAGTCCTTGC TCCGCATGTG AATGCGCAGA CACTGTTGTT ACTTGGGCAG CATGCTGACG ATCAACTGGA AACTTTTTTA CTCGCATTAA AGCGCGGCAG TGGCCCAAAA GGGCTGGCCG CAATGGCTGC TTATGCCCCG TTTGCCGAGG GACATTTGCT CCGCCCTCTA TTAACCGTCT CACGTCAACA CATTGAAGCC TATGCCAAGC AGCACAAACT CACTTGGGTT ATCGATGAAA GTAATGCAGA TATCCGCTAC GAGCGCAATT TTCTACGCCA TCAGGTGACA CCTGTACTTA CCGAGCGCTG GCCGAGCATT CGCCAAGCTG TGCAACGTAG TGCTGAGCTG TGTGCAGAAC AAGAAGCGCT GCTGCAAGAG TTTTTAGCTG AAGCATTAAA AAAGGCGATC ACTGCTGAGG GCGGATTGTC GATCGCCGTT CTGGCTGAGG GCAGTGAGGG AATGCGTCGA CAACTGATCC GAGCTTGGTT TGCGCACCAT AGGCTACCGA TGCCCAGTCG TCAGCACACG GAGCGTATTT GGTGTGAGGT GGCGCTGGCG AGTGAGGACG CCAATCCAAA ATTAAAGTTG AACCATATTG AGGTGCGCCG TTTTCAGCAC TGTCTGTACC TCGTGCCACC AGAAAAAGAT CTTTCAGGCT GGCGCAGTGC ATTAGTGCCT GAACAACGTT TGCCGTTGCC GCAAGGTCTA GGTCATCTTC AGTTGACCAG CAAGGCAGGT GGAAATATCA AGCTGCCCGA TGACCCCAGC CAATTATGGG TTAGCTTTGA GCCGCAAGGG CTAGAGGCTT GTCCTGTTGG GCGGGTGGGT TCGCGCAAAC TCAAAAAACT GTTTCAAGAA TATGGTGTGC CGAGTTGGCG GCGGCGGCAA ACACCCATCC TCATGTACCA AAATAGAGTG GTCTGTGTCG CGGATTTATT CGTAGATCGT GATTGGAGTG GGCAAGATTG TGAGTTGGTT TGGTTCAAAT CTCATGATTC TGTGCCAAAA TAA
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Protein sequence | MDDLYLHFVQ QLARYPFRKI LLALSGGVDS QVLLALLARG RDEFGWDVTA VHVHHGLSPN ADQWAQHCQR CCREVGMACQ IEYVQLDVAS GESIEKLARE ARYRVLAPHV NAQTLLLLGQ HADDQLETFL LALKRGSGPK GLAAMAAYAP FAEGHLLRPL LTVSRQHIEA YAKQHKLTWV IDESNADIRY ERNFLRHQVT PVLTERWPSI RQAVQRSAEL CAEQEALLQE FLAEALKKAI TAEGGLSIAV LAEGSEGMRR QLIRAWFAHH RLPMPSRQHT ERIWCEVALA SEDANPKLKL NHIEVRRFQH CLYLVPPEKD LSGWRSALVP EQRLPLPQGL GHLQLTSKAG GNIKLPDDPS QLWVSFEPQG LEACPVGRVG SRKLKKLFQE YGVPSWRRRQ TPILMYQNRV VCVADLFVDR DWSGQDCELV WFKSHDSVPK
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