Gene VC0395_A1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1834 
SymboltilS 
ID5135612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1948599 
End bp1949921 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content52% 
IMG OID640533291 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_001217758 
Protein GI147674336 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATC TCTATCTCCA CTTTGTGCAG CAATTAGCTC GCTATCCTTT TCGCAAAATC 
CTTCTCGCAC TGAGCGGCGG CGTGGATTCG CAAGTTCTGC TTGCCCTTCT GGCGCGTGGA
CGCGATGAGT TTGGTTGGGA TGTGACCGCG GTTCATGTTC ATCATGGGTT GAGCCCGAAT
GCCGATCAGT GGGCGCAGCA TTGCCAGCGC TGTTGCCGTG AAGTCGGCAT GGCCTGTCAA
ATCGAATATG TACAGCTGGA TGTGGCAAGT GGTGAAAGTA TTGAGAAACT GGCGCGAGAG
GCGCGTTATC GAGTCCTTGC TCCGCATGTG AATGCGCAGA CACTGTTGTT ACTTGGGCAG
CATGCTGACG ATCAACTGGA AACTTTTTTA CTCGCATTAA AGCGCGGCAG TGGCCCAAAA
GGGCTGGCCG CAATGGCTGC TTATGCCCCG TTTGCCGAGG GACATTTGCT CCGCCCTCTA
TTAACCGTCT CACGTCAACA CATTGAAGCC TATGCCAAGC AGCACAAACT CACTTGGGTT
ATCGATGAAA GTAATGCAGA TATCCGCTAC GAGCGCAATT TTCTACGCCA TCAGGTGACA
CCTGTACTTA CCGAGCGCTG GCCGAGCATT CGCCAAGCTG TGCAACGTAG TGCTGAGCTG
TGTGCAGAAC AAGAAGCGCT GCTGCAAGAG TTTTTAGCTG AAGCATTAAA AAAGGCGATC
ACTGCTGAGG GCGGATTGTC GATCGCCGTT CTGGCTGAGG GCAGTGAGGG AATGCGTCGA
CAACTGATCC GAGCTTGGTT TGCGCACCAT AGGCTACCGA TGCCCAGTCG TCAGCACACG
GAGCGTATTT GGTGTGAGGT GGCGCTGGCG AGTGAGGACG CCAATCCAAA ATTAAAGTTG
AACCATATTG AGGTGCGCCG TTTTCAGCAC TGTCTGTACC TCGTGCCACC AGAAAAAGAT
CTTTCAGGCT GGCGCAGTGC ATTAGTGCCT GAACAACGTT TGCCGTTGCC GCAAGGTCTA
GGTCATCTTC AGTTGACCAG CAAGGCAGGT GGAAATATCA AGCTGCCCGA TGACCCCAGC
CAATTATGGG TTAGCTTTGA GCCGCAAGGG CTAGAGGCTT GTCCTGTTGG GCGGGTGGGT
TCGCGCAAAC TCAAAAAACT GTTTCAAGAA TATGGTGTGC CGAGTTGGCG GCGGCGGCAA
ACACCCATCC TCATGTACCA AAATAGAGTG GTCTGTGTCG CGGATTTATT CGTAGATCGT
GATTGGAGTG GGCAAGATTG TGAGTTGGTT TGGTTCAAAT CTCATGATTC TGTGCCAAAA
TAA
 
Protein sequence
MDDLYLHFVQ QLARYPFRKI LLALSGGVDS QVLLALLARG RDEFGWDVTA VHVHHGLSPN 
ADQWAQHCQR CCREVGMACQ IEYVQLDVAS GESIEKLARE ARYRVLAPHV NAQTLLLLGQ
HADDQLETFL LALKRGSGPK GLAAMAAYAP FAEGHLLRPL LTVSRQHIEA YAKQHKLTWV
IDESNADIRY ERNFLRHQVT PVLTERWPSI RQAVQRSAEL CAEQEALLQE FLAEALKKAI
TAEGGLSIAV LAEGSEGMRR QLIRAWFAHH RLPMPSRQHT ERIWCEVALA SEDANPKLKL
NHIEVRRFQH CLYLVPPEKD LSGWRSALVP EQRLPLPQGL GHLQLTSKAG GNIKLPDDPS
QLWVSFEPQG LEACPVGRVG SRKLKKLFQE YGVPSWRRRQ TPILMYQNRV VCVADLFVDR
DWSGQDCELV WFKSHDSVPK