| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1823 |
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| Symbol | fadE |
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| ID | 5136519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1937508 |
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| End bp | 1939952 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533280 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_001217747 |
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| Protein GI | 147675558 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATCT TGCTCTCTAC CTTAATCATG CTCTTGATAC TCGGCGCATG CCTGTATCAA
AGAACATCCC TATTTACCTC ATTAGCAGCA CTGACTTTCA CCATGCTAGC GCTTTCACTG
TTTGGGCCTG TTGGCTTTTT CGGTTGGGCG CTCTATTTGG CGGCCGTCGT CGTGCTCTGT
CTGCCATCCG TTCGCCAATC GTTGATCAGT GGTAAAGCAT TAGCAGTGTT TAAAAAAGTA
CTGCCCGCGA TGTCACAGAC CGAGAAAGAA GCCCTCGAGG CCGGAACAGT TTGGTGGGAA
GCCGAACTGT TTAAAGGCAA GCCGGACTGG AAAAAGCTGC ACAATATCCA AGCTCCGAAG
CTGTCTGCTG AAGAACAAGC CTTCCTGGAT GGCCCAGTCA ATGAAGTGTG TGCCATGGTT
AGCGACTACC AAGTCACCCA TGAACTGGCA GATTTACCGC CAGAAGTGTG GACTTTCCTC
AAAGAGAAGA AATTCTTCGC CATGATCATC AAAAAACAGT ATGGCGGCTT AGAATTTTCA
GCTTATGCAC AATCTTTGGT GCTGCAAAAA CTGACCGGTG TTTCTGGTGT TCTCTCCTCA
ACCGTAGGCG TACCTAACTC TTTAGGCCCC GGTGAGCTGC TGCAACATTA CGGTACCGAA
GAGCAGAAAA ACTATTACTT ACCTCGCTTA GCGGAAGGCA AAGAGATCCC CTGTTTTGCT
TTAACCAGCC CAGAAGCCGG TTCAGACGCA GGTTCTATCC CTGATTTCGG TGTAGTTTGT
AAAGGACAAT GGGAAGGCAA AGAAGTTCTA GGTATGCGCC TGACGTGGAA CAAGCGCTAC
ATCACTCTCG CACCGGTGGC GACTGTGCTG GGGCTTGCCT TTAAACTGCG CGACCCTGAA
GGACTGCTCG GTGATAAAGA AGAGCTCGGC ATTACCTGTG CCTTGATCCC AACGCATCTT
AAAGGCGTGG AGATCGGCCA TCGCCACTTC CCACTCAACG TGCCTTTCCA AAACGGTCCA
ACCCGTGCCA AAGATCTGTT TGTGCCGCTG GATTTCATCA TCGGTGGTCC AAAAATGGCA
GGCCAAGGCT GGCGCATGTT GGTGGAATGT CTTTCGGTGG GACGCGGTAT TACCCTACCT
TCCAACTCAA CCGGCGGCAT TAAAACTGCG GCACTCGCTA CAGGTGCTTA TGCGCGTATT
CGCCGCCAGT TCAAACAACC TATCGGTCAG ATGGAAGGAA TTGAAGAGCC ATTAGCGCGC
CTAGCCGGTA ACGCTTATGT GATGGATGCA GCAAGCAACC TGACTGTCGC GGGTATCGAT
CTCGGTGAAA AGCCTTCGGT AATTTCTGCG ATCGTAAAAT ATCACTGTAC CCACCGCGGA
CAACGCTCAA TTATTGATGC GATGGACATT GTCGGCGGTA AAGGCATCTG TTTAGGCCCC
GCTAACTTCC TCGCTCGCGG GTATCAAGGT GCTCCAATTG CCGTTACCGT AGAAGGCGCG
AACATTCTTA CCCGCTCGAT GATCATCTTT GGTCAAGGTG CGATTCGCTG CCATCCTTAT
GTACTCAGAG AAATGGAAGC GGCTTATAGC CCAAATTCTG ATGCGGTAGA AAAATTTGAT
AGTGCCCTAG CAGGACACGT TGGCTTTGTG CTCAGCAACT TAGTGCGCAG CCTATGGCTT
GGTTTGACTG ATGGTTATGG TTCACAAGCA CCAACCCGTG ATGCGACCAA GCGCTACTAC
CAACAGCTTA ATCGTTACAG TGCTAACTTG GCCCTGCTTG CGGATATCTC CATGGCAGTA
TTGGGCGGTT CACTCAAACG TAGAGAGCGT CTCTCTGCCC GTTTAGGGGA TATTCTGAGC
CAGCTTTACT TAAGCTCAGC GACCTTAAAA CGTTTTGAAA ACGATGGCCG TCCAGCCGAA
GATTTACCAC TGGTCCATTG GGGCTTACAA GATAGTTTGC GCCAAACTGA AATCGCCATT
GATGAGTTCT TGGCTAACTT CCCAAATCGG ATTATTGGCC GCGCATTACG TGTACTCATG
ATGCCTTTCG GCCGTGTGCG TAAAGCGCCA AGTGACAAGC TCGATAGCAA GCTCGCGCAG
ATCTTGCAAA CCCCGAGTGA AACACGTTCA AGAATTGGTC GTCACCAATA CTTAACACCG
AGTGATAACA ATCCTGCGGG TAAGATAGAA CAAGCGTTGA ATGTGATTTT ACAAGCTGAG
CCGCTGTTTG AAAAAGCGTG CAAAGCGCTT GGTCAACGCC GCCCATTTAT GGGGTTGGAT
GAAGTCGCCA AGCTGGGCTT AGAAGCCAAA GTGCTGACCA TTCAGGAAGC GGCACTGCTG
AGCGAAGCGG AAGCGCATCG TCTCTACACC ATCAATGTCG ATGACTTTGC CCCACAAGAG
CTGGCCGCAA AAAAGCGCAC ACAACGTAAA GCTGAAGTGG CTTAA
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| Protein sequence | MEILLSTLIM LLILGACLYQ RTSLFTSLAA LTFTMLALSL FGPVGFFGWA LYLAAVVVLC
LPSVRQSLIS GKALAVFKKV LPAMSQTEKE ALEAGTVWWE AELFKGKPDW KKLHNIQAPK
LSAEEQAFLD GPVNEVCAMV SDYQVTHELA DLPPEVWTFL KEKKFFAMII KKQYGGLEFS
AYAQSLVLQK LTGVSGVLSS TVGVPNSLGP GELLQHYGTE EQKNYYLPRL AEGKEIPCFA
LTSPEAGSDA GSIPDFGVVC KGQWEGKEVL GMRLTWNKRY ITLAPVATVL GLAFKLRDPE
GLLGDKEELG ITCALIPTHL KGVEIGHRHF PLNVPFQNGP TRAKDLFVPL DFIIGGPKMA
GQGWRMLVEC LSVGRGITLP SNSTGGIKTA ALATGAYARI RRQFKQPIGQ MEGIEEPLAR
LAGNAYVMDA ASNLTVAGID LGEKPSVISA IVKYHCTHRG QRSIIDAMDI VGGKGICLGP
ANFLARGYQG APIAVTVEGA NILTRSMIIF GQGAIRCHPY VLREMEAAYS PNSDAVEKFD
SALAGHVGFV LSNLVRSLWL GLTDGYGSQA PTRDATKRYY QQLNRYSANL ALLADISMAV
LGGSLKRRER LSARLGDILS QLYLSSATLK RFENDGRPAE DLPLVHWGLQ DSLRQTEIAI
DEFLANFPNR IIGRALRVLM MPFGRVRKAP SDKLDSKLAQ ILQTPSETRS RIGRHQYLTP
SDNNPAGKIE QALNVILQAE PLFEKACKAL GQRRPFMGLD EVAKLGLEAK VLTIQEAALL
SEAEAHRLYT INVDDFAPQE LAAKKRTQRK AEVA
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