Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1806 |
Symbol | gltX |
ID | 5136540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1919897 |
End bp | 1921426 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640533263 |
Product | glutamyl-tRNA synthetase |
Protein accession | YP_001217731 |
Protein GI | 147675108 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCCGAAAA TCGTGCGTAG CATCGCGTTA ACTCGGGTGT TAGAATACCG CCCAAAATTT CGCATGCTGA GCTCTCAGCA AAAGAATCTC ACAAAGGTAA TTCAAATGAC GGTTAAAACT CGTTTTGCGC CTAGTCCAAC TGGGTATCTG CACGTTGGTG GTGCGCGTAC AGCACTCTAT TCTTGGTTAT ATGCTAAAAG CCAAGGTGGT GAATTTGTTC TGCGTATTGA AGACACCGAC CTAGAACGCT CTACTCAGGC GGCGGTGGAT GCCATTATTG AAGGCATGAC GTGGTTAGGT TTGGAATGGG ATGAAGGCCC ATACTACCAA ACCAAACGTT TTGATCGTTA CAACCAAGTG ATTGATCAGC TATTGGCAGA AGGCAAAGCC TACAAGTGCT ATGCGCCGAA AGAGCTGCTG GATGAAATCC GTGCTGAGCA AGAAGCCAAC AAAGAGATGC CTCGCTACGA TGCGAATCAT CCAAAAATCA AAGCGGTCAA TGATGCGGCA AAAGAAGGTG AGCCTTGCTG TATCCGTTTC CGTAACCCGA AAGAGGGGAG CGTCGTTTTT GATGACCAAA TCCGTGGCCG CATCGAAATC CGTAACGACC AACTGGATGA TCTGATCATC CGTCGTACTG ATGGCACTCC AACCTATAAC TTCTGTGTAG TCGTGGATGA TGTCGATATG GGTATCAGCC ATGTGATTCG TGGTGAAGAC CACATCAACA ACACGCCACG CCAGATCAAC ATTTACAAAG CCATGGGCGC GACCATCCCA ACCTTTGCGC ACTGTGCAAT GATCTTGGGT GATGATGGTG CCAAGCTATC TAAGCGCCAT GGCGCGGTTT CTGTAATGCA ATACCGTGAT GATGGTTACC TCCCAGAAGC GCTGCTGAAC TACTTAGTGC GTTTAGGTTG GGGACATGGC GACCAAGAGA TCTTCTCACG CGATGAAATG ATCAACTTAT TCAGCCTTAA CGCAATTTCA AAATCAGCGT CAGCGTTTAA CACTGACAAA CTGCTGTGGT TGAACAACCA CTACATCAAG ACTTCAGAGC CTGAGTATGT GGCGAAACAC CTTGAGTGGC ATTTCGAGAA CCAAGGCATT AACAAAGCGA CCGGCCCTGC TTTAGCGGAA GTGGTGAAGT TGGTGGGTGA GCGTTGCAAT ACCTTGGTTG AGCTTGCGCA GCAATCACGT TACTTCTACG AAGATTTTGC TGAGTTTGAT GCTGATGCCG CGAAGAAACA CCTGCGTGGT GTGGCAAAAG AGCCACTGAT GCTAGCTCTG AGCAAGATTG AAGCGCTGAC AGAATGGAAT ACCGAAGCAC TGCATCACGT GATCGCACAA GTGTGTGAAG AGCTTGAGAT TGGCATGGGT AAAATCGGTA TGCCACTGCG TGTTGCTGTG ACTGGCGGTG GCCAATCGCC TTCTGTGGAT GCGGTGATGA ACTTGATTGG TCAAGAACGT GTAATTGCAC GTATCAAAAT GGCACTAGAG TACATCGAAA CTCGCGAAGC GAATGCATAG
|
Protein sequence | MPKIVRSIAL TRVLEYRPKF RMLSSQQKNL TKVIQMTVKT RFAPSPTGYL HVGGARTALY SWLYAKSQGG EFVLRIEDTD LERSTQAAVD AIIEGMTWLG LEWDEGPYYQ TKRFDRYNQV IDQLLAEGKA YKCYAPKELL DEIRAEQEAN KEMPRYDANH PKIKAVNDAA KEGEPCCIRF RNPKEGSVVF DDQIRGRIEI RNDQLDDLII RRTDGTPTYN FCVVVDDVDM GISHVIRGED HINNTPRQIN IYKAMGATIP TFAHCAMILG DDGAKLSKRH GAVSVMQYRD DGYLPEALLN YLVRLGWGHG DQEIFSRDEM INLFSLNAIS KSASAFNTDK LLWLNNHYIK TSEPEYVAKH LEWHFENQGI NKATGPALAE VVKLVGERCN TLVELAQQSR YFYEDFAEFD ADAAKKHLRG VAKEPLMLAL SKIEALTEWN TEALHHVIAQ VCEELEIGMG KIGMPLRVAV TGGGQSPSVD AVMNLIGQER VIARIKMALE YIETREANA
|
| |