| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1784 |
|---|
| Symbol | flgJ |
|---|
| ID | 5137268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1892804 |
|---|
| End bp | 1893742 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640533241 |
|---|
| Product | flagellar rod assembly protein/muramidase FlgJ |
|---|
| Protein accession | YP_001217709 |
|---|
| Protein GI | 147673638 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1705] Muramidase (flagellum-specific) |
|---|
| TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATA ATTCCAATGA CATTGGCTTT ATCCAAGATA TCGCCGGACT CGACAAGTTA
CGCCAAAAGG CGGTGAATGG TGATGAAAAT GCCGGACAGT CTGCGCTAAC CGCAGCGGCT
CGTCAGTTTG AATCGATCTT CACTTCCATG ATGCTCAAAT CCATGCGTGA TGCGAATAGT
GACTTTAAAT CCGATCTGAT GAGTAGCCAG AATGAAGATC TTTATCGCCA GATGCTGGAT
GAACAGATGG CGAGTGAGTT CAGTTCATCT GGTTCGCTTG GCTTGGCCGA TATGATCGTT
GCCCAGCTTT CGACCGGACA AACGGCGAGC GAGCAAAAAG GGGAGGATGG CTTCCAAGAA
GCCATGCGCC GTGTGGAACA TGCACGTAAA ACGGCCAGTG AACGCAGCAA TGAAGACTTG
GTGGCGGCGG TGTATCCGCT GCGTAAAACA CAAGCGGTTC AATCGACGCA GTTTGATTCT
CGCCATTCGT TTGTTACTAA GCTCAAACCT TATGCGGATA AAGCGGCACG CATGCTCGGG
GTCGATTCTT CCTTGTTGAT TGCTCAAGCG GCACTGGAAA CAGGCTGGGG GCAAAAAATG
GTCAAAAATG CCCGTGGCAA CAGCAATAAC CTCTTTAACA TCAAAGCCGA TCGCAGCTGG
CAGGGGGATA AAGTCGCAAC CCAAACCTTG GAATATCACA ACAATGTTCC AGTGGTGGAG
AAAGCGGCAT TTCGCTCTTA TGCGAGCTTT GATGAAAGCT TTAACGACTA TGTTCGCTTC
TTGGAAAACA ATCCACGTTA TACCAATGCG TTGGATCATG GCGGAAACAG TGAACGCTTT
ATCCACGGTA TCCACCGTGC TGGATATGCG ACCGACCCGC AATACGCCGA CAAGGTGCTG
CGTGTAAAAG CGCAAATCGA TCAAATGAAT CTGTTATAA
|
|---|
| Protein sequence | MINNSNDIGF IQDIAGLDKL RQKAVNGDEN AGQSALTAAA RQFESIFTSM MLKSMRDANS
DFKSDLMSSQ NEDLYRQMLD EQMASEFSSS GSLGLADMIV AQLSTGQTAS EQKGEDGFQE
AMRRVEHARK TASERSNEDL VAAVYPLRKT QAVQSTQFDS RHSFVTKLKP YADKAARMLG
VDSSLLIAQA ALETGWGQKM VKNARGNSNN LFNIKADRSW QGDKVATQTL EYHNNVPVVE
KAAFRSYASF DESFNDYVRF LENNPRYTNA LDHGGNSERF IHGIHRAGYA TDPQYADKVL
RVKAQIDQMN LL
|
|---|
| |