Gene VC0395_A1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1750 
Symbol 
ID5137016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp1871095 
End bp1871577 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content47% 
IMG OID640533207 
Producthypothetical protein 
Protein accessionYP_001217689 
Protein GI147675041 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0053342 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCTG CAATCAATCT TGCAAAGAAA AATAAAATCT CCCATACCAT CCATCAGTAT 
GAACATGATC CGAGCCATGC CAGTTATGGC CTAGAAGCGG CGCAGGCGCT CGGTCAAGAT 
CCGAAGCGCG TATTCAAAAC CTTACTGTTT TGTATGAATG GCGAGGAAAA AAATCTCGCG 
GTAGCGATTA TTCCTGTCGA TCTCAAACTG AATTTAAAGC TCGCGGCCAA AGCGGCCAAA 
GCCAAAAAAG CCGAGATGGC CAAACCAGAG ATTGCTGAGA AAACCACAGG TTATGTGGTG 
GGGGGGATAA GTCCTCTCGG CCAGAAAAAA GCGCTGCCAA CCTTTATTCA TCAAAGTGCG 
CAAAGCCAAG CGACGATTTG TGTCAGTGCG GGTAAACGTG GTTTAGAAAT TGAGTTATCA 
CCGCAAGATC TCGCGCGCTT AACCCGTGGC CAGTTTGCGG ATTTGTGTCA AGAAGAGAAT 
TAA
 
Protein sequence
MTPAINLAKK NKISHTIHQY EHDPSHASYG LEAAQALGQD PKRVFKTLLF CMNGEEKNLA 
VAIIPVDLKL NLKLAAKAAK AKKAEMAKPE IAEKTTGYVV GGISPLGQKK ALPTFIHQSA 
QSQATICVSA GKRGLEIELS PQDLARLTRG QFADLCQEEN