| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1738 |
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| Symbol | dapA |
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| ID | 5137321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1859550 |
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| End bp | 1860428 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533195 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_001217677 |
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| Protein GI | 147673601 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCAG GAAGTATCGT TGCGTTAATT ACCCCATTTA CTCCGGACGG TGAAGTCGAT
TATATCAGCC TGAAAAAGCT GGTCGATTTC CATGTTGATG CAGGAACCGA TGCGATTGTT
TCCGTTGGCA CCACCGGTGA ATCCGCGACG CTAACGGTCG AAGAACACGT GAAAGTAGTA
GCAAAAACGG TGGAGTTCGC TGAAGGTCGT CTGCCTATTA TTGCTGGAAC AGGCGCAAAT
GCGACCCATG AAGCGGTCAC TTTTAGCCGC CTGCTGAACA ACACAGGTAT TGCAGGGTAT
TTGAGTGTCA CGCCTTATTA CAATAAGCCG ACCCAAGAAG GTCTGTTCCT GCACTACAAC
GCGATTGCGC AAGAAACCGA TATTCCCGTG ATTTTGTACA ACGTGCCGGG ACGTACCGCT
GTGGATATGC GTCCAGAAAC CGTTGCCCGT TTATCTGAAA TCAAGAACAT TGTCGCACTG
AAAGATGCAA CCGGTGATTT AAGCCGTGTT GCGAAGCACC GTGAGATGTG TAAAGAAGGT
TTTGTCCTAC TCAGCGGTGA TGATGCCACA GGCCTTGAGT TCGTCAAACT CGGGGGGCAA
GGTGTGATTT CAGTGACCAA CAATATCGCT GCTGCCGACA TGGCGAAGAT GATGCATTTG
GCGCTGGATG GTAAGTTTGA CGAAGCGGCG AGCATCAACC AACGCTTGAT GACACTGCAT
AAAAATCTGT TTATCGAATC GAGCCCAATT CCAGTGAAAT GGGCAGCCCA TAAGATGGGA
TTGATTGCAA ATGGTGATCT GCGTCTACCT TTGACGCAAC TTTCGGAACC AGCACGCCCA
ATCGTTGCCC AAGCCCTGTC TGAAGCCTGT ATTTATTAA
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| Protein sequence | MFSGSIVALI TPFTPDGEVD YISLKKLVDF HVDAGTDAIV SVGTTGESAT LTVEEHVKVV
AKTVEFAEGR LPIIAGTGAN ATHEAVTFSR LLNNTGIAGY LSVTPYYNKP TQEGLFLHYN
AIAQETDIPV ILYNVPGRTA VDMRPETVAR LSEIKNIVAL KDATGDLSRV AKHREMCKEG
FVLLSGDDAT GLEFVKLGGQ GVISVTNNIA AADMAKMMHL ALDGKFDEAA SINQRLMTLH
KNLFIESSPI PVKWAAHKMG LIANGDLRLP LTQLSEPARP IVAQALSEAC IY
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