Gene VC0395_A1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1706 
SymbolfliO 
ID5135065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1831285 
End bp1831674 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content51% 
IMG OID640533164 
Productflagellar protein FliO 
Protein accessionYP_001217646 
Protein GI147675753 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAAAT TGGCGGCTCT GTTTCTCATC CCTGTCCCCG GGTTGGCTGC TACCAGCAGC 
CAACTGGATT TAGCGACCAC CTTGGGGTCG CTTTTGTTCG TTATCGCTCT GATACTGCTA
CTGGCTTGGT TACTCAAACG CATGCGTGTG CCTGCTTTCG GTCAGCAAAA AGGGCTGAGT
ATCATCAAAC AGTTACCCGT TGGCACCCGA GAGCGGGTGA TGATCATCCA AGTGGGCGAA
GAGCAGTATT TGATTGGGGT GACCACTCAG TCAATTCAAC TGCTGGCCAA ACTCGATAAT
CCACTCATAC AGGAGGAGCT GCCGGCAACC GCCTTTTCTA ACCAGTTGAT GCAGCTACTG
AAAAAACATG AAACGGACTC AAAGACTTAA
 
Protein sequence
MRKLAALFLI PVPGLAATSS QLDLATTLGS LLFVIALILL LAWLLKRMRV PAFGQQKGLS 
IIKQLPVGTR ERVMIIQVGE EQYLIGVTTQ SIQLLAKLDN PLIQEELPAT AFSNQLMQLL
KKHETDSKT