Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1706 |
Symbol | fliO |
ID | 5135065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1831285 |
End bp | 1831674 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640533164 |
Product | flagellar protein FliO |
Protein accession | YP_001217646 |
Protein GI | 147675753 |
COG category | [N] Cell motility |
COG ID | [COG3190] Flagellar biogenesis protein |
TIGRFAM ID | [TIGR03500] flagellar biosynthetic protein FliO |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGAAAAT TGGCGGCTCT GTTTCTCATC CCTGTCCCCG GGTTGGCTGC TACCAGCAGC CAACTGGATT TAGCGACCAC CTTGGGGTCG CTTTTGTTCG TTATCGCTCT GATACTGCTA CTGGCTTGGT TACTCAAACG CATGCGTGTG CCTGCTTTCG GTCAGCAAAA AGGGCTGAGT ATCATCAAAC AGTTACCCGT TGGCACCCGA GAGCGGGTGA TGATCATCCA AGTGGGCGAA GAGCAGTATT TGATTGGGGT GACCACTCAG TCAATTCAAC TGCTGGCCAA ACTCGATAAT CCACTCATAC AGGAGGAGCT GCCGGCAACC GCCTTTTCTA ACCAGTTGAT GCAGCTACTG AAAAAACATG AAACGGACTC AAAGACTTAA
|
Protein sequence | MRKLAALFLI PVPGLAATSS QLDLATTLGS LLFVIALILL LAWLLKRMRV PAFGQQKGLS IIKQLPVGTR ERVMIIQVGE EQYLIGVTTQ SIQLLAKLDN PLIQEELPAT AFSNQLMQLL KKHETDSKT
|
| |