Gene VC0395_A1698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1698 
Symbol 
ID5136441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp1824608 
End bp1825231 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content52% 
IMG OID640533155 
Producthypothetical protein 
Protein accessionYP_001217637 
Protein GI147673621 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.968956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTGA GTGTTTTGTA TATCATTGGG ATCACGGCGG AAGCCATGAC CGGAGCCTTG 
AGTGCCGGCC GTCGCAAAAT GGACTGGTTT GGCGTCATGC TGGTTGCCAG CGCTACTGCG 
ATTGGCGGTG GTACAGTGCG CGATATTTTG CTGGGCCACT ACCCACTCGG CTGGGTAAAG 
AATCCTGAAT ATCTGGCGAT TACTTGTGTC GCGGGCGTAC TGACCACTTG GGTCTATAAG 
TGGGTCATCA AGCTCAAAGG CCTGTTTATT CGTCTTGATG CGCTGGGGCT GATTGTGTTT 
TCGATCATCG GTACGCAAGT GGCGATGCGC ATGGGACTGC ACCCCGGCAT CTGTTTAGTT 
TCTGCGGTAG TCACTGGCGT GTTTGGTGGT TTGCTGCGCG ATTTAATTTG CCGTCAACCA 
CCTTTGGTAT TGCATGAAGA GTTGTACGCC TCGATTGCTC TGTTGGCATC GGGACTGTAT 
CTCGCCTTGC TTGAATTTGG TGTCAGTGAT GTGGTAAGCA CAGTGGTCAC TCTGGTGGTC 
GGTTACACTT TGCGGATGGC TGCGGTGCGT TTTAAATGGC GTCTGCCCTC TTTCCATTTA 
GAAACCGAGA ACTCCATTCA CTAG
 
Protein sequence
MLLSVLYIIG ITAEAMTGAL SAGRRKMDWF GVMLVASATA IGGGTVRDIL LGHYPLGWVK 
NPEYLAITCV AGVLTTWVYK WVIKLKGLFI RLDALGLIVF SIIGTQVAMR MGLHPGICLV 
SAVVTGVFGG LLRDLICRQP PLVLHEELYA SIALLASGLY LALLEFGVSD VVSTVVTLVV 
GYTLRMAAVR FKWRLPSFHL ETENSIH