| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1682 |
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| Symbol | seqA |
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| ID | 5135555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1811001 |
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| End bp | 1811534 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533139 |
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| Product | replication initiation regulator SeqA |
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| Protein accession | YP_001217621 |
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| Protein GI | 147674637 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3057] Negative regulator of replication initiationR |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000000781212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAA TTGAGGTTGA TGAGGATCTA TACCGTTACA TTGCGAGTCA GACTTTGCAT
ATTGGTGAAA GTGCCTCCGA TATTTTGCGT CGTCTTCTCA ATGTAGATGG TGAATTAGCC
ACTGCTGCGC CTGCTGCTGA GCCGAAAGGG ATAGTCGTAA GCAAAGATGC CGCTTTCGAT
ACCAAAATTG ATGGTGTTAA AGCGATGCGT TCACTGCTGA TTTCCGATGA ATTTGCCGGG
CTAAAAAATG CGATCGATCG CTTCATGCTG ATTCTGTCTA CTCTTCATCG CATCGACTCT
GCGAGCTTTT CTGAAGCGAC TATGTTCAAA GGTCGCAAGC GCGTTTACTT TGCTGATAAC
GAACAGACGT TGCTTGCCAG CGGGCAAACA ACCAAACCTA AGGCGATCCC AAATACGCCG
TTTTGGGTGA TCACCAACAA CAACACTAGC CGCAAGCAAC AGATGGTTGA ACAGGTGATG
GTGCGCATGG GCTTCCCAAG CGACATTATT GAGAAAGTTA CCCATTCCAT TTGA
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| Protein sequence | MKTIEVDEDL YRYIASQTLH IGESASDILR RLLNVDGELA TAAPAAEPKG IVVSKDAAFD
TKIDGVKAMR SLLISDEFAG LKNAIDRFML ILSTLHRIDS ASFSEATMFK GRKRVYFADN
EQTLLASGQT TKPKAIPNTP FWVITNNNTS RKQQMVEQVM VRMGFPSDII EKVTHSI
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