Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1676 |
Symbol | sdhD |
ID | 5136293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1805133 |
End bp | 1805477 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640533133 |
Product | succinate dehydrogenase, hydrophobic membrane anchor protein |
Protein accession | YP_001217615 |
Protein GI | 147674183 |
COG category | [C] Energy production and conversion |
COG ID | [COG2142] Succinate dehydrogenase, hydrophobic anchor subunit |
TIGRFAM ID | [TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.110674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAAGC ATGTCTCTTC CTTTGGTCGT AATGGTGTTC ACGATTACTT ATTGATCCGC GCTTCAGCGA TCATCTTAGT TTTGTACACT ATTTATATCG TGAGTTTTTG CGCGTTCACG GACATCTCTT ATGTCGCGTG GACTCAATTC TTTGGTAGCA CGTTCACCAA AGTCTTCACA ATGTTGGCAT TAGTTTCAGT ATTGATTCAT GGCTGGATTG GCCTATGGCA AGTACTGACG GATTACATTA AGTGCTCCAA ATTGCGTGCA GGACTGCAAC TTGTGGTCAT CGCCGTTCTA CTTGGATACT TCTTCTCTGG CCTATTTGTA TTGTGGGGTG CCTAA
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Protein sequence | MVKHVSSFGR NGVHDYLLIR ASAIILVLYT IYIVSFCAFT DISYVAWTQF FGSTFTKVFT MLALVSVLIH GWIGLWQVLT DYIKCSKLRA GLQLVVIAVL LGYFFSGLFV LWGA
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