| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1673 |
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| Symbol | sucA |
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| ID | 5136838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1799742 |
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| End bp | 1802552 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533130 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001217612 |
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| Protein GI | 147675042 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAACG GCGTGATGAA GGCATGGCTC GAGTCTTCAC ACTTGGCTGG CGCCAATGCA
ACTTACGTAG AAGATCTCTA CGAACTGTAT CTAAGTGATC CCGATCTGGT AAGTGAGGAG
TGGAAACGTG TTTTTGATGG GTTGCCTGCG CACCCAACGA ATGTGGTTGA ACAACCGCAC
TCACGCGTCC GTGACTACTT CCGACGACTC GCTCAAGAGA CTAAGCATTA CAATGTCCAA
GTTAGTGATC CTGAAGTCGA TGCAAAACAA GTAAAAGTAC TGCAGCTAAT TAACGCATAC
CGTTTCCGCG GTCATGAAGC TGCCAAGCTT GACCCTCTCG GTTTATGGAA CCGCCCTGAA
GTGGCGGAAC TGAATCCCTC ATTCCATAAT TTGACCCAAG AAGATATGGA AGAGACCTTC
AACGTGGGCT CCTTTGCGAT TGGCAAAGAC ACGATGAAGC TGAAAGATAT CTATCAATCC
CTACAAAAAA TCTACTGTGG CTCTGTCGGT GCAGAATACA TGCACATCAC CGACACTGAG
CAGAAGCGTT GGATTCAACA GCGTCTCGAA CCAGTTGTGG GTACCCCTGT ATTCAGTAAA
GAAGAAAAGC GTACTTTCCT TGAAGAGCTG ACTGCAGCTG AAGGTTTAGA GCGCTATCTT
GGTGCGAAAT TCCCTGGTGC TAAACGTTTC TCTCTCGAAG GGGGGGATGC CTTAGTTCCG
ATGACCAAAG AGATGATCCG TCACGCGGGT GCCAGTGGCA TGCGTGAAGT GGTGATTGGG
ATGGCGCACC GCGGTCGCTT GAACATGCTG GTCAACGTTC TGGGTAAAAA ACCGCAAGAT
CTGTTTGATG AGTTTGCCGG TAAACATGGC GAAGGCTGGG GCACAGGTGA TGTGAAATAT
CACCAAGGTT TCTCCGCTGA CTTTGCGACA CCGGGCGGTG ATGTTCACTT AGCACTGGCT
TTCAACCCAT CGCATCTTGA GATTGTGAAC CCTGTTGTGA TGGGTTCAGT GCGCGCGCGT
CAAGACCGCC TAGGTGATGA AGATGGCAGT AAAGTGCTAC CTATCACTAT CCATGGTGAC
TCTGCGATTG CAGGACAAGG TGTGGTGGCT GAAACCTTCA ACATGTCTCA AGCGCGTGGT
TTCTGCGTCG GTGGTACAGT ACGTATCGTG GTCAATAACC AAGTGGGCTT CACGACATCA
AACCCACGCG ATACTCGCTC AACCATGTAC TGTACCGATA TTGCCAAGAT GGTACAGGCA
CCGATTTTCC ACGTGAATTC AGACGATCCT GAAGCTGTAG CCTTTGTCAC TCGTCTAGCG
CTTGATTACC GTAATGAATT CAAACGCGAT GTGGTGATTG ATCTGGTGTG TTATCGCCGT
CATGGTCATA ACGAAGCGGA TGAGCCAAAC GCAACTCAGC CATTGATGTA CCAAAAAATC
AAGAAGCATC CAACACCTCG CAAGCTGTAT GCAGATGTGT TAACTGAGCG TGGTGAGTGC
GATCTCGAAA CCGCGACTCA ACTGGTGAAT GAATATCGCG ATGCCCTAGA TCACGGTGAA
GTGGTGGTCA AAGAATGGCG TCCAATGGCG ATGCACTCTG TGGACTGGTC ACCGTATTTA
GGTCACGACT GGCATATCCC TTGGAATAGC GAATATGCGA TGGAGCGATT GCAAGATCTT
GGTCGTCGTG TTTGCCAATA TCCGGAAAGC CATGTGTTGC ATAGCCGTGT AGAAAAAATC
TATCAAGATC GTCTCTCTAT GATCTCTGGC GAGAAGATGC TGGATTGGGG TATGGCTGAA
ACGCTTGCGT ATGCCACATT GCTTGATGAC GGTAAGCGCA TCCGTATCTC GGGTCAGGAC
TCTGGTCGTG GAACCTTCTT CCACCGTCAC GCCGTTCTGC ATAACCAAAA CGATGCGAGT
ACTTATATTC CACTCTCACA GATCCATGCT GGCCAAGGCC CGTTTGAAGT CTTTGACTCA
GTATTGTCAG AAGAGGCGGT ATTGGCATTC GAATACGGCT ATGCGACAGC GGAGCCTAGC
GGTTTGACGT TGTGGGAAGC ACAGTTTGGT GATTTTGCTA ACGGTGCGCA GGTGGTTATT
GACCAGTTTA TCTCCTCTGG TGAACAGAAG TGGGGTCGTC TATGTGGCCT GACTATGTTG
CTGCCACACG GTTATGAAGG CCAAGGCCCT GAGCACTCCT CTGCACGTTT AGAGCGTTAC
TTGCAGCTGT GTGCTGAGCA AAACATGCAG GTGGTTGTTC CGTCTACCCC TGCTCAGGTT
TACCACATGA TTCGTCGTCA AGTGGTTCGC CCAATGCGCC GCCCTCTGGT GGTGATGTCT
CCTAAATCGC TGCTGCGTCA TCCACTGTGT GTCTCCAGTA TGGAAGATCT TGCCCACGGT
ACTTTCCAGC CGGCGATTGG TGAAATTGAT GCGCTGAATC CGTCGCAAGT AAAACGCGTT
GTGTTCTGTT CTGGTAAGGT TTATTACGAT CTCCTTGAAC AGCGCCGAGC CAATGAACAG
CAAGACGTGG CGATTGTTCG TATCGAACAG TTGTACCCAT TCCCTCTGGA AGAAGTACAA
GCGGCCATTG CAAATTACAC CAATGTGGTG GATTACGTCT GGTGTCAGGA AGAACCGCAA
AACCAAGGTG CTTGGTACAG TAGCCAACAT AACTTCCGCG CTGCGATTCC AGCGGGTGCT
GATCTGAAAT ACGCAGGTCG TCCCGCTTCG GCATCTCCTG CGGTCGGCTA TATGTCGGTG
CACATGAAAC AACAAAAAGC GTTGATTGAA GACGCTCTGA CCCTAGCGTA A
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| Protein sequence | MHNGVMKAWL ESSHLAGANA TYVEDLYELY LSDPDLVSEE WKRVFDGLPA HPTNVVEQPH
SRVRDYFRRL AQETKHYNVQ VSDPEVDAKQ VKVLQLINAY RFRGHEAAKL DPLGLWNRPE
VAELNPSFHN LTQEDMEETF NVGSFAIGKD TMKLKDIYQS LQKIYCGSVG AEYMHITDTE
QKRWIQQRLE PVVGTPVFSK EEKRTFLEEL TAAEGLERYL GAKFPGAKRF SLEGGDALVP
MTKEMIRHAG ASGMREVVIG MAHRGRLNML VNVLGKKPQD LFDEFAGKHG EGWGTGDVKY
HQGFSADFAT PGGDVHLALA FNPSHLEIVN PVVMGSVRAR QDRLGDEDGS KVLPITIHGD
SAIAGQGVVA ETFNMSQARG FCVGGTVRIV VNNQVGFTTS NPRDTRSTMY CTDIAKMVQA
PIFHVNSDDP EAVAFVTRLA LDYRNEFKRD VVIDLVCYRR HGHNEADEPN ATQPLMYQKI
KKHPTPRKLY ADVLTERGEC DLETATQLVN EYRDALDHGE VVVKEWRPMA MHSVDWSPYL
GHDWHIPWNS EYAMERLQDL GRRVCQYPES HVLHSRVEKI YQDRLSMISG EKMLDWGMAE
TLAYATLLDD GKRIRISGQD SGRGTFFHRH AVLHNQNDAS TYIPLSQIHA GQGPFEVFDS
VLSEEAVLAF EYGYATAEPS GLTLWEAQFG DFANGAQVVI DQFISSGEQK WGRLCGLTML
LPHGYEGQGP EHSSARLERY LQLCAEQNMQ VVVPSTPAQV YHMIRRQVVR PMRRPLVVMS
PKSLLRHPLC VSSMEDLAHG TFQPAIGEID ALNPSQVKRV VFCSGKVYYD LLEQRRANEQ
QDVAIVRIEQ LYPFPLEEVQ AAIANYTNVV DYVWCQEEPQ NQGAWYSSQH NFRAAIPAGA
DLKYAGRPAS ASPAVGYMSV HMKQQKALIE DALTLA
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