| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1664 |
|---|
| Symbol | feoB |
|---|
| ID | 5137395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1786833 |
|---|
| End bp | 1789109 |
|---|
| Gene Length | 2277 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640533121 |
|---|
| Product | ferrous iron transport protein B |
|---|
| Protein accession | YP_001217603 |
|---|
| Protein GI | 147673265 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0370] Fe2+ transport system protein B |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTATC AAGTACTCAC CGTAGGCAAC CCGAATAGTG GAAAAACAAC CTTATTCAAT
GGTCTCACTG GGGCAAAACA GCAAGTCGGT AACTGGGCGG GGGTCACTGT TGAGAAAAAA
ACGGGTAGTT TTGTGCATGC AGGCGATGAA TTTTCACTCA CCGATCTGCC CGGAATTTAT
GCTTTAGACA GCGGTAATGA CAGTAACAGT ATTGATGAAT CGATCGCATC GCGTGCAGTG
TTGACGCATC CTGCGGATGT GATCATTAAT GTGGTTGATG CGACGTGCCT TGAGCGCAGC
TTATATATGA CGCTGCAACT GCGTGAATTG CGCCGTCCAA TGATTGTCGT ACTTAACAAA
ATGGATGCGC TTAAGCGCGA ACGTGTTCAT CTCGACCTCA AACAACTAGA AGCGTTTTTG
GGGTGCCCTG TGTTGGCGCT TTCTGCCAAC AATAAAGAGC AAGTTCGCCG CTTTAAAGAA
AAATTGCATA AGCTGCTGGT ACAAGGGATT GCGTTAAAGC AGATTGAACT TCACTACGGT
GCTGAATTTG AGTCATTGAT TCATGAGCTA GAACCAATGT TTGCTGAGCA AGCGGTTTCT
GCGCGCGCGC TGGCGATTCG AGCCTTAGAA AACGATCGTT TAGTGATTAA CGGATTAAAA
GAGGCGGAGC GCCAAAATGT AGAGCAACGT CAACATGAGT GCCAGGTTGA TATTGATCTT
CTCGTTGCCA ACGTACGTTA TACCTATTTA CATGAGCTGT GCACCCACGT GCGACGCACC
GAGGGTAAAC TGAGCCATAA ATTCACCGAA AAAGCCGATC GCGTTATCCT CAATAAGTGG
GTTGGCATCC CGTTCTTTTT TGCTGTGATG TACCTGATGT TCATGTTTTC AATCAACATC
GGCAGTGCTT TTATCGATTT CTTTGATATT GGCGTCGGTG CATTGTTGGT TGATGGCGGA
CACCATTTAC TGGATGACCA TCTCCCCGTT TGGTTAGTGA CCTTAATCGC TGATGGTGTT
GGTGGCGGTA TTCAAACCGT TGCAACCTTT ATTCCTGTCA TTGCTTGCCT GTATTTATTC
TTAGCGGTAT TAGAAAGCTC CGGTTACATG TCTCGTGCTG CATTTGTTCT GGATAAAGTG
ATGCAGAAAA TCGGTTTGCC CGGTAAAGCG TTTGTCCCGC TGGTCCTTGG CTTCGGGTGT
AACGTACCTT CTATTATGGC AACGCGCACG CTGGATCAAG AGCGTGAACG TAAGCTGGCG
GCCTCCATGG CTCCGTTTAT GTCTTGTGGT GCTCGTTTAC CGGTTTATGC GTTGTTTGCG
GCGGCATTTT TCCCGCAAAG TGGCCAAAAT GTGGTGTTTG CCCTCTACTT ATTAGGGATT
GTTGCTGCGG TATTGACTGG TTTGGTACTG AAAAAGACCC TCTATCCTGG TGTCAGCGAG
AGCTTAATCA TGGATATGCC GGACTATGAA ATCCCAACCT TACAAAACGT GGTGATCAAA
ACATGGCAGA AGCTGAAGCG TTTTGTATTG GGAGCCGGTA AAACCATTGT TGTTGTTGTG
ACGATTTTGA GCTTTTTAAA CTCAGTCGGT ACCGATGGTT CATTTGGTAA CGAAAACAGT
GATAAGTCCG TGCTTTCTAA AGCAGCTCAA TTTGTCACTC CTGTTTTTTC ACCGATGGGG
GTTACTCAGG AAAACTGGCC TGCAACGGTT GGCATCATTA CAGGTATTTT TGCCAAAGAA
GCGGTTGTGG GGACCTTAAA TAGTCTTTAC ACCAGCACAC CTGATGCAGA AGAGGCTGCG
GAATACGATT TGCTGGCGAG TTTGCAAGAA GCCTTAATGA CGATTCCTGA CAACCTTGCA
GGGCTCAGTT TCAGCGATCC ACTAGGAATT GAAGTCGGGG ATTTGACGGA TACCGAGGCT
GTTGCGCAAG AGCAAGAAGT AGACGGCTCG ATCTTTGGTA ATTTACACAC CTATTTTGCC
AATGCTCATG TAGCTTTTGC TTATCTGATC TTTATTTTGC TTTATACCCC TTGTGTAGCC
GCGATGGGCG CTTATGTGCG CGAATTTGGT GCAGCTTACG CGCGCTTTAT TGCGGTATGG
ACGATGGGGC TGGCCTACGG TTCTGCGGTG CTCTACTACC AAGCTACCCA TATTGCTGAG
CACCCAATGT ATAGCTTAAT TTGGATTGGT GTGATTGTGG GCATCGGATT CGCTACCTAC
TGGGCACTTA AACAGACAGG GCGTAAGCAA AAGATGATAG AGGTATCTGT CGCGTGA
|
|---|
| Protein sequence | MKYQVLTVGN PNSGKTTLFN GLTGAKQQVG NWAGVTVEKK TGSFVHAGDE FSLTDLPGIY
ALDSGNDSNS IDESIASRAV LTHPADVIIN VVDATCLERS LYMTLQLREL RRPMIVVLNK
MDALKRERVH LDLKQLEAFL GCPVLALSAN NKEQVRRFKE KLHKLLVQGI ALKQIELHYG
AEFESLIHEL EPMFAEQAVS ARALAIRALE NDRLVINGLK EAERQNVEQR QHECQVDIDL
LVANVRYTYL HELCTHVRRT EGKLSHKFTE KADRVILNKW VGIPFFFAVM YLMFMFSINI
GSAFIDFFDI GVGALLVDGG HHLLDDHLPV WLVTLIADGV GGGIQTVATF IPVIACLYLF
LAVLESSGYM SRAAFVLDKV MQKIGLPGKA FVPLVLGFGC NVPSIMATRT LDQERERKLA
ASMAPFMSCG ARLPVYALFA AAFFPQSGQN VVFALYLLGI VAAVLTGLVL KKTLYPGVSE
SLIMDMPDYE IPTLQNVVIK TWQKLKRFVL GAGKTIVVVV TILSFLNSVG TDGSFGNENS
DKSVLSKAAQ FVTPVFSPMG VTQENWPATV GIITGIFAKE AVVGTLNSLY TSTPDAEEAA
EYDLLASLQE ALMTIPDNLA GLSFSDPLGI EVGDLTDTEA VAQEQEVDGS IFGNLHTYFA
NAHVAFAYLI FILLYTPCVA AMGAYVREFG AAYARFIAVW TMGLAYGSAV LYYQATHIAE
HPMYSLIWIG VIVGIGFATY WALKQTGRKQ KMIEVSVA
|
|---|
| |