| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1657 |
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| Symbol | flhA |
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| ID | 5137093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1777423 |
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| End bp | 1779516 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533114 |
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| Product | flagellar biosynthesis protein FlhA |
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| Protein accession | YP_001217596 |
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| Protein GI | 147675206 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0357682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA CACTGCCATT TGCGGACAAA TTGCCTTCAA TTCCACAGCG TAGCATGCCT
GCGATCGGTG CTCCGGTCAT GGTATTGGCC GCATTGGCGA TGGTTGTCCT CCCAATGCCA
GCCTTTCTGC TCGACTTGTT CTTCACTTTC AACATCGCTC TGTCGTTAGT GGTGCTTCTA
GTCACCGTCT ATACCCGTAG GCCATTAGAT TTTGCGGCGT TTCCAACGGT ACTGCTGATC
GCGACCTTGC TACGCTTGGC ACTGAACGTT GCGTCAACGC GAGTCGTTTT GCTGTACGGT
CATGAAGGTC CAGGTGCGGC GGGTAACGTT ATCGAAGCGT TTGGTAACGT GGTGATTGGT
GGGAATTACG CGGTCGGTTT GGTGGTGTTC CTTATCCTGA TGATCATCAA CTTTATGGTG
GTAACCAAAG GTGCGGGACG AATTTCCGAA GTTAGTGCCC GCTTTACCTT AGATGCCTTG
CCCGGCAAGC AGATGGCGAT TGATGCTGAC TTAAACGCGG GCTTGATTGA CCAAGAACAA
GCACGTGTGC GCCGTTTTGA AGTCACCAAA GAAGCGGACT TCTACGGTTC GATGGATGGT
GCGTCAAAAT TTGTAAAGGG TGATGCGATC GCCGGTATTT TGATTCTTTT TATCAACATC
ATCGGTGGCC TGAGTATCGG AATGATCCAG TATGATTTGG GTTTCAAAGA AGCGATCGAA
ATCTACACCC TGTTGACCAT CGGTGATGGC TTAGTTGCTC AAATTCCATC ACTGCTCTTA
TCGATTGGCG CTGCGATTAT GGTTACGCGT CAAAATACCG ATGAGGACAT GGGACAGCAG
GTTATCTTCC AACTGTTTGA TAACCCGAAA GCTCTCACCA TTACCGCAGG TATCCTGTTT
GTTATGGGGA TTGTCCCCGG GATGCCACAT TTTGCCTTCC TGTTTTTAGC GCTACTGGCC
AGTGGTGCGG CGTATTGGCT GCACCGTAAA CAGAAAACCA AAGCGGAGAA TAAAAATCTG
CCCGCCAAGA GCGATGTGGA AACCCCGACC CAACGTGAAC TGTCATGGGA TGATGTACAG
CCGGTTGACG TGATTGGTTT GGAAGTGGGT TATCGCTTGA TCCCCTTGGT GGATAAAGAT
CAAGGTGGCG AGCTGCTTGA ACGCGTTAAA GGGGTGCGTA AAAAACTGTC GCAGGACTTT
GGTTTCCTTA TTCCATCGGT ACATATTCGT GACAACCTAG AATTAACGCC CAATAGTTAC
CGCATCACCT TGATGGGCGT AGCCGTGGGT GAAGCAGAAA TTCGGCCAGA TCAAGAGTTG
GCGATTAACC CGGGACAAGT GTACGGCATG ATTGATGGTG AGCGCACTCG CGACCCGGCT
TTTGGTCTGG ATGCAGTGTG GATACGGGAA GATCAGCGTG AGCATGCGCA GGCTTTGGGC
TATACCGTGG TCGATTCTTC CACTGTGCTC GCCACTCATC TTAGTCAACT GCTCACCAAC
AATGCGGCAC AGCTGATTGG CCATGAAGAA GTTCAGAATC TGCTGGAAAT GCTCTCGCGC
TCCGCGCCCA AACTGGTGGA AAACTTTGTA CCAGATCAGC TTTCGCTGGG GGTCGTGGTC
AAAGTTCTAC AGAATTTGCT GCATGAAGCG ATCCCGATCC GCGATATTCG CACCATAGTG
CAAACCCTTT CGGAATACGC GAGTAAGAGT CAAGAACCCG ACATTTTAAC TGCAGCGGTG
CGCATCTCAC TCAAACGACT TATTGTCCAA GAAATCAATG GGGTAGAGCC TGAATTGCCT
GTAATTACCT TAATTCCGGA GCTGGAACAA ATTTTGCATC AAACTATGCA AGCTTCGGGT
GGTGAATCAG CAGGTATTGA GCCGGGACTG GCGGAAAGAC TGCAAATGGC GCTAAGCCAC
GCCACTCAAG AGCAGGAGTT GAAAGGGGAA CCCGCAGTAT TGCTGACATC TGGCGTATTG
CGTTCAACGC TAGCGAAGTT TGTGAAAAAC ACCATTCCCA ACCTTCGCGT GCTCTCCTAT
CAGGAGATCC CCGATGAGAA ACAAATTCGA ATTGTGCAGG CCGTGGGTAA TTAA
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| Protein sequence | MKFTLPFADK LPSIPQRSMP AIGAPVMVLA ALAMVVLPMP AFLLDLFFTF NIALSLVVLL
VTVYTRRPLD FAAFPTVLLI ATLLRLALNV ASTRVVLLYG HEGPGAAGNV IEAFGNVVIG
GNYAVGLVVF LILMIINFMV VTKGAGRISE VSARFTLDAL PGKQMAIDAD LNAGLIDQEQ
ARVRRFEVTK EADFYGSMDG ASKFVKGDAI AGILILFINI IGGLSIGMIQ YDLGFKEAIE
IYTLLTIGDG LVAQIPSLLL SIGAAIMVTR QNTDEDMGQQ VIFQLFDNPK ALTITAGILF
VMGIVPGMPH FAFLFLALLA SGAAYWLHRK QKTKAENKNL PAKSDVETPT QRELSWDDVQ
PVDVIGLEVG YRLIPLVDKD QGGELLERVK GVRKKLSQDF GFLIPSVHIR DNLELTPNSY
RITLMGVAVG EAEIRPDQEL AINPGQVYGM IDGERTRDPA FGLDAVWIRE DQREHAQALG
YTVVDSSTVL ATHLSQLLTN NAAQLIGHEE VQNLLEMLSR SAPKLVENFV PDQLSLGVVV
KVLQNLLHEA IPIRDIRTIV QTLSEYASKS QEPDILTAAV RISLKRLIVQ EINGVEPELP
VITLIPELEQ ILHQTMQASG GESAGIEPGL AERLQMALSH ATQEQELKGE PAVLLTSGVL
RSTLAKFVKN TIPNLRVLSY QEIPDEKQIR IVQAVGN
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