| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1652 |
|---|
| Symbol | cheZ |
|---|
| ID | 5137732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1773084 |
|---|
| End bp | 1773803 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640533109 |
|---|
| Product | chemotaxis protein CheZ |
|---|
| Protein accession | YP_001217591 |
|---|
| Protein GI | 147673688 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3143] Chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00206146 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCAT TAGAACAGGC TAAAGAACTC GTGCAACTTT TGGAACAAGG ACGTCAAGAC
GACGCTAATC GCCTTTTCAC CTATGTCTAC GAGTCTGCCA ATAACCCTAT GTTTAAAGAG
ATAGGGATGC TGACGCGAGA CTTACACGAA GCGCTGAAAA ACTTTCAGAT TGATGAGCGC
TTCAGTGAAA TCGCGACGGA TGAAATTCCA GACGCACGGG AAAGACTGCA TTACGTTATA
CAGAAAACGG AAGTCGCAGC GAACAAAACC ATGGATGCAG TGGATCGGTG TATGCCGATA
GCCGACAAAC TACATGAAAG CTTGCTGCTG ATTCGCCCTG AATGGAATGG CTTGATGAAT
GGTCGGATTG AACTGATGCA CTTCAAGTCA CTATGCCACC GGATTGATGA CTTGCTCTCG
CAAGTAGAAG GCGACAGCAG TGAATTGCGT GGTGAATTGA CTGAGATCCT GATGGCTCAA
GACTTTCAAG ACCTGACAGG ACAAATCATC AAACGTGTGA TTAATCTGGT CAATGAGGTT
GAAAAACGTT TAGTCGAAAT ACTGACGGTT TTTGGCGCAG CGCAAAAAGA ACAAAAAGCA
GACAAGGCGA CAGTGGCATC AATAGAACCA GAGGGGCCGA TTCTCAATCC TCATGAACGA
ATTGATGCTG TCTCATCTCA AGACGAAGTT GACGATCTGT TATCGAGTCT TGGATTTTAG
|
|---|
| Protein sequence | MISLEQAKEL VQLLEQGRQD DANRLFTYVY ESANNPMFKE IGMLTRDLHE ALKNFQIDER
FSEIATDEIP DARERLHYVI QKTEVAANKT MDAVDRCMPI ADKLHESLLL IRPEWNGLMN
GRIELMHFKS LCHRIDDLLS QVEGDSSELR GELTEILMAQ DFQDLTGQII KRVINLVNEV
EKRLVEILTV FGAAQKEQKA DKATVASIEP EGPILNPHER IDAVSSQDEV DDLLSSLGF
|
|---|
| |