| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1637 |
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| Symbol | ccmH |
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| ID | 5136167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1759363 |
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| End bp | 1760577 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533094 |
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| Product | cytochrome c-type biogenesis protein CcmH |
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| Protein accession | YP_001217576 |
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| Protein GI | 147675723 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00151362 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGATGT TTTGGATCTC GACCCTATTA CTGGTGGCGA TTGCGGTGGT TTTCGTCATC
ATTCCGTTTA TTCAAAAGCG TGCGAATAAC GATCAGGCTT TGCGCGATGA GCTGAATAAA
GCGTTTTACA AAGACCGCTT GAAAGAGCTT GAAGAGGAAA CCGAAGAAGG CATTGTTGCC
GATCAACAAG ATTTGATTGC CGACTTAAAA CAGACTCTGC TTGACGACAT TCCAACCCAG
CAAAAACATC AGCAGGAAAA TCGTGTTTCA CTGTGGATGG TTGCCCTGCC TTCAGTATTG
TTGGTAGTCG GATTGAGTTA TGCGCTGTAC GCCAAGTTTG GTCACTATCA GCATGTTCAG
GCTTGGCAGC AAGTGTCAGC ACAACTGCCT GAATTGTCAA AAAAACTCAT GTCGCCACAA
GCGGAACTCA GTGACGAAGA GATGAATGAT TTGACGTTGG CACTGCGCAC TCGACTGCAT
TATCAGCCTG ATGATGTTAC CGGTTGGTTG TTGCTGGGTC GGATTGGCCT TGCTAATCGC
GATCTGGAAA CCGCGATTGG CGCGATGAAG AAAGCTTTTG CTCTGGATAA TGAAGATCCG
GATGTGAAAT TTGGTTACGC ACAAGCTTTG ATGCTTTCGA ATGATCCTGT CGACCAGCAA
GAAGCGAAGT CGATTCTGCT CAAGTTAGCC CAACGTGGTT ATGCTGATTT ACGCGTCTAT
TCATTATTGG CGTTTGATGC TTTTGAAAGT GGAGATTTTC CTGCTGCAAT CAAGTACTGG
AGTTTGATGC AACAAGCGAT TGGTCCTGAC GATGCTCGTT ATGAGATGCT CAGCCGCAGT
ATTGAAAGCG CTCGTAAGAG AATGGGCGAG GGCATGGCAG AGGGTCAATC GGTGAAAGTC
ACCATTAATC TAGGCGAGCA GGTTAAGGTT GATCCTAACG CAGTGTTGAT CGTATCTATC
CATGCTCCCG GTTCGCCAAT GCCTGTTGCT GCAGCCCGTT ATCCGCTAGG TGAGTTTCCA
AGAACCGTGG TGTTGGATGA CAATAACAGC ATGATGGAAG GATCAAAATT GTCCAGTCTT
GAGTCGTATG TGGTACGTGT GCGTATCGAC AGCGATGGTA ATGTGGCGAC GAAAAGCGGT
GACTGGTATG CCGAAAGTCC CACAATGAAA ACAGGTGAGC CTGTTGACGT TGTGCTTGAT
AAGCAGTATG AATAA
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| Protein sequence | MWMFWISTLL LVAIAVVFVI IPFIQKRANN DQALRDELNK AFYKDRLKEL EEETEEGIVA
DQQDLIADLK QTLLDDIPTQ QKHQQENRVS LWMVALPSVL LVVGLSYALY AKFGHYQHVQ
AWQQVSAQLP ELSKKLMSPQ AELSDEEMND LTLALRTRLH YQPDDVTGWL LLGRIGLANR
DLETAIGAMK KAFALDNEDP DVKFGYAQAL MLSNDPVDQQ EAKSILLKLA QRGYADLRVY
SLLAFDAFES GDFPAAIKYW SLMQQAIGPD DARYEMLSRS IESARKRMGE GMAEGQSVKV
TINLGEQVKV DPNAVLIVSI HAPGSPMPVA AARYPLGEFP RTVVLDDNNS MMEGSKLSSL
ESYVVRVRID SDGNVATKSG DWYAESPTMK TGEPVDVVLD KQYE
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