Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1574 |
Symbol | |
ID | 5136100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1693809 |
End bp | 1694522 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640533031 |
Product | hypothetical protein |
Protein accession | YP_001217515 |
Protein GI | 147673304 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.366703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTAA AAATTCTCGC CTTAGATACG GCCACCGAGC GCTGTTCCGT CGCGCTACTC GTCGGCAATA CCGTTTATTC ACGCAGTGAA ATCGCCCCGC GTGATCACAC CAAAAAAGTA TTGCCTATGG TGGACGAAGT CTTAAAAGAA GCAGGCGTAA CGCTACAAGA ATTGGATGCT TTGGCTTTTG GCCGTGGCCC GGGAAGTTTT ACTGGGGTAC GGATTGGCAT TGGAATTGCA CAAGGTTTAG CCTTTGGGGC AGATCTGCCG ATGATTGGCA TTTCGACCTT AGCGGCGATG GCGCAAGCGG CGTATCGCTT GCAGGGGTTA ACCCATGTTG CCAGCGCGAT TGATGCGCGC ATGGAAGAGG TGTATTGGGG GCGCTATGTG CGTCAAGAAG ATGGCAGTTG GCAAGCCGCG GAAGCGGAGT GTGTGATTGC ACCTGCGCTG TTAGCGCAGA CCTTGACCCA AGATGATTTA ACCCAAGATG AGCAGATTTG GGCGACCGCC GGAACGGGTT GGGATGCTTA TCCCGCACTG GCGGATCTGC CGTTGCAACT GCAAACCAGC GAAGTGCTTT ACCCTGATGC GCAAGATATG GCTTATTTGG CTCAGTTCGA ATTAGCGCAA GGCAATCAAG TGAGTGTGGA GCAGGCAAGC CCTGTGTATC TGCGCGATAC TGTGGCTTGG AAAAAACTGC CGGGTCGCGA GTAA
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Protein sequence | MSVKILALDT ATERCSVALL VGNTVYSRSE IAPRDHTKKV LPMVDEVLKE AGVTLQELDA LAFGRGPGSF TGVRIGIGIA QGLAFGADLP MIGISTLAAM AQAAYRLQGL THVASAIDAR MEEVYWGRYV RQEDGSWQAA EAECVIAPAL LAQTLTQDDL TQDEQIWATA GTGWDAYPAL ADLPLQLQTS EVLYPDAQDM AYLAQFELAQ GNQVSVEQAS PVYLRDTVAW KKLPGRE
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