| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1569 |
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| Symbol | rnd |
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| ID | 5135982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1688963 |
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| End bp | 1690108 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533026 |
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| Product | ribonuclease D |
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| Protein accession | YP_001217510 |
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| Protein GI | 147675516 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000054851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCAACA ACTGCGAGTT ATCTGTGAAT TATCAAATTA TTAGCCAAGT AGGCGATCTA
CAACGAGTCT GTCTTGCTGC CCGTGATGCG GATGTGGTGA TGCTGGATAC CGAATTTGTC
CGTACCCGCA CCTTCTTTCC GCAACTGGGG TTGATCCAGA TGTTTGATGG GGAAAACCTA
TCGCTGATTG ATCCCACCGT GCTGGATGAA ATGACGCCGT TTGTCGAGTT ATTGCAAGAC
ACTTCGGTAT TGAAAGTGCT GCACGCCTGT GGCGAAGATT TGGAAGTGTT CCAGAATGCG
TTTGGCTGCA CGCCTTTCCC TATGGTGGAT ACTCAGATTA TGGCCGCGTT TTTGGGCTAC
GGTTTATCCA CTGGGTTTGC GGCGTTAGTG CAAGACCAAC TGCAAGTTGA GCTAGACAAA
AGCGAATCGC GCACCGATTG GTTAGCGCGC CCTCTAAGTG ACAAGCAACT GGAATATGCC
GCGGCCGATG TGTTCTATCT GCTACCGATG TACGAAAAAC TGGTCGAGCA AGTGACCCAA
GCCGGCTGGT GGGACGCGGC ATTGCAAGAA AGTGAACTGC AAGTGGCCAA GCGCACTAAA
GTCAGCAACC CAGAGCTCGC TTACTTAGAC ATCAAAGGGG CTTGGCAGCT TAAACCTAAA
GAGCTGGCGA TCCTCAAACC CCTAGCAACA TGGCGTTACC ATGAAGCGGT AAATCGAGAT
TTGGCGCTGA ACTTCGTGAT TAAAGAAACG GACTTACTGA CCATTTCGCG TTTGGCACTT
CGTAGTCCGA AACGCATGGA AGAGGAGGGG GTTGATCCGC ACGCAATCCG TCGTCACAGC
AGCAAAATTA TCGCTATGGT GAAAACGGCG CTAGAAACGC CAGCCGATGC GTATCCACCA
GAAATCGTGC CGATCATGGA ATACCCAGGT TATAAGCAGT TGTTCAAACG TTTGAAAGAT
GAAGTAAAGA GCGTTTCGAA CACCAGTGGC CTTGCGACCG AATTTTTGGC GTCGAAAAAA
CAGCTTAACC AACTGCTGAG TTGGGTATGG AAGCGCGACC GCGACCCAGC CCGCTTGCCT
GATTTAATGC AAGGGTGGCG TTTACCATTA CTTGGCGAGA AGCTCAATAC GCTCGTCTTG
AAATAA
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| Protein sequence | MSNNCELSVN YQIISQVGDL QRVCLAARDA DVVMLDTEFV RTRTFFPQLG LIQMFDGENL
SLIDPTVLDE MTPFVELLQD TSVLKVLHAC GEDLEVFQNA FGCTPFPMVD TQIMAAFLGY
GLSTGFAALV QDQLQVELDK SESRTDWLAR PLSDKQLEYA AADVFYLLPM YEKLVEQVTQ
AGWWDAALQE SELQVAKRTK VSNPELAYLD IKGAWQLKPK ELAILKPLAT WRYHEAVNRD
LALNFVIKET DLLTISRLAL RSPKRMEEEG VDPHAIRRHS SKIIAMVKTA LETPADAYPP
EIVPIMEYPG YKQLFKRLKD EVKSVSNTSG LATEFLASKK QLNQLLSWVW KRDRDPARLP
DLMQGWRLPL LGEKLNTLVL K
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