| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1500 |
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| Symbol | miaE |
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| ID | 5135428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1613147 |
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| End bp | 1613923 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640532958 |
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| Product | tRNA-(MS[2]IO[6]A)-hydroxylase |
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| Protein accession | YP_001217443 |
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| Protein GI | 147673611 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4445] Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000036268 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCCATGA TTCATCCATC TGCTATCCAA CAACTTTTAG AACCGATTAA CCATTTCCTG
CAATGTCCTA CACCCGACGA ATGGGTTGAA GAAGCGCGCA AACCTGAAAA CCTACGTGTT
TTGTTGTTAG ACCATTTACT ATGTGAGCTG AAAGCTGGTC AATCCGCCAT GTTTCTGATC
CGTAAGTATG CGGTTGATAA AGAGAGTGAA CTTTCGCTAT TGGATTGGTT TAAACCTTAT
GAAGACTTTG CGTATCGCAA AATGGGAGAT ATCCAATCGC TCAAAGGCAA AAGCCAAATC
TCCAAAGCGA TCATTGCCAA ATCGGATTCT CCTTATAGCC AAGATTTGAT CGATAAAATG
GTATTGCTGA TCAAAGAAGA GCTACACCAT TTCTATCAAG TGTTGGAAAT TATGCAAGCG
CGCAATGTGG AGTATGAGTC AATTCCGGCT AGCCGTTATG CCAAAAGCCT TCTAGCCCAT
ATGAAGACTC ATGAACCACA GACATTGATT GATAAGCTGA TAGTAGGCGC TTATATTGAG
GCTCGCTCTT GTGAGCGCTT TGCCAAACTC GCCCCCTACT TAGATGACGA GATAGCAAAA
TTTTATGTTT CTCTGCTTCG CTCTGAAGCT CGCCATTATC AAGACTACTT GCAACTGGCT
GAACAAATTG CGGGCTACGA TATCTCTGAA CGTGTTGCGT ATTTTGGCCG AGTCGAAGCG
GAGTTAATTT CCACTCCCGA TAGCGATTTC AAGTTTCACA GTGGTATTCC TAAATAG
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| Protein sequence | MPMIHPSAIQ QLLEPINHFL QCPTPDEWVE EARKPENLRV LLLDHLLCEL KAGQSAMFLI
RKYAVDKESE LSLLDWFKPY EDFAYRKMGD IQSLKGKSQI SKAIIAKSDS PYSQDLIDKM
VLLIKEELHH FYQVLEIMQA RNVEYESIPA SRYAKSLLAH MKTHEPQTLI DKLIVGAYIE
ARSCERFAKL APYLDDEIAK FYVSLLRSEA RHYQDYLQLA EQIAGYDISE RVAYFGRVEA
ELISTPDSDF KFHSGIPK
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