| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1497 |
|---|
| Symbol | cysB |
|---|
| ID | 5135106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1611058 |
|---|
| End bp | 1612032 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640532955 |
|---|
| Product | transcriptional regulator CysB |
|---|
| Protein accession | YP_001217440 |
|---|
| Protein GI | 147674603 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000166035 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC AGCAGTTAAA GTACATTGTG GAAGTGGTCA ATCATAATTT GAATGTGTCT
GCGACCGCGG AAAACCTATA TACCTCTCAG CCGGGGATCA GTAAACAGGT CAGGCTGTTA
GAAGATGAGC TTGGAATTCA GATTTTTGAG CGAAGCGGCA AGCATTTAAC GCAAGTAACG
CCTGCGGGCG AGCACATAGT GCGTATTGCG ACGGAAATTT TATCGCGCGT CGAAAGCATC
AAGGCGGTTG CTGCCGAGCA TACGCATCCA GAAATGGGCA CGCTGAATAT TTCCACTACC
CATACCCAAG CCCGCTATGC TCTGCCAGAG GTGATTAAAG GTTTTACTAA GCGTTATCCA
AGAGTTTCCT TGCACATGCA TCAAGGCACG CCAACTCAAA TGTCGGAAGC GATAGCCAAA
GGCACTGCAA ATTTTGCGAT TGCGACAGAA GCTTTGCATT TGTACCAAGA TGCAATCATG
TTGCCTTGTT ATCACTGGAA TCGTTCGATA GTGGTGCCTA AAGATCACCC GCTGACCAAG
AAAGAGCAGG TGACCATAGA AGATTTAGCG GCTTATCCAT TAGTGACCTA TGTTTTCGGC
TTTACTGGGC GTTCAGAGCT TGATAGTGCA TTCAATCGGG TTGGCATGAC ACCTAAAGTG
GTCTTTACCG CCACCGATGC AGATGTGATA AAAACGTATG TGCGCATGGG TATTGGGGTG
GGTGTGATTG CTAGTATGGC GGTAGACAAA AAGCAAGATA CGGATCTGGT GGCGATTGAT
GCAAGCCATA TCTTCAGTGC GAGTACCACC AGTATTGGTT TTCGCCGTGG TACTTTCCTG
CGCTCTTATA TGTTTGATTT TATGGAGCGC TTTGCTCCAC ATCTTACCCG TCCCGTAGTA
GAGCAAGCCA TCTCTTTGAA ATCGAATATT GAAATAGCAG AAATGTTTAA GGACATTGAT
CTGCCTGTGC GTTAA
|
|---|
| Protein sequence | MKLQQLKYIV EVVNHNLNVS ATAENLYTSQ PGISKQVRLL EDELGIQIFE RSGKHLTQVT
PAGEHIVRIA TEILSRVESI KAVAAEHTHP EMGTLNISTT HTQARYALPE VIKGFTKRYP
RVSLHMHQGT PTQMSEAIAK GTANFAIATE ALHLYQDAIM LPCYHWNRSI VVPKDHPLTK
KEQVTIEDLA AYPLVTYVFG FTGRSELDSA FNRVGMTPKV VFTATDADVI KTYVRMGIGV
GVIASMAVDK KQDTDLVAID ASHIFSASTT SIGFRRGTFL RSYMFDFMER FAPHLTRPVV
EQAISLKSNI EIAEMFKDID LPVR
|
|---|
| |