Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1490 |
Symbol | fadR |
ID | 5136198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1601170 |
End bp | 1602009 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640532948 |
Product | fatty acid metabolism regulator |
Protein accession | YP_001217433 |
Protein GI | 147675341 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCATTA AGGCAAAAAG CCCAGCCGGT TTCGCTGAGA AGTATATTAT TGAAAGTATT TGGAACGGCC GCTTTCCGCC AGGTTCCATC TTACCTGCAG AGCGTGAGCT TTCTGAATTG ATCGGTGTTA CGCGTACCAC ACTACGTGAG GTGTTACAGC GTTTAGCGCG TGATGGTTGG CTCACGATTC AACACGGTAA ACCCACCAAG GTGAATCAGT TTATGGAAAC ATCAGGTTTG CATATTCTTG ATACCTTGAT GACTCTTGAT GCAGAGAATG CCACCAGCAT TGTTGAAGAC TTACTAGCTG CAAGAACCAA TATCAGCCCC ATTTTCATGC GTTACGCTTT TAAGCTAAAT AAAGAGAGCG CAGAGCGGAT CATGATCAAT GTGATTGAGT CTTGTGAAGC CTTGGTTAAC GCCCCTTCTT GGGATGCGTT TATCGCAGCT TCTCCCTATG CGGAAAAAAT CCAGCAGCAC GTGAAAGAAG ACAGCGAAAA AGATGAGCTC AAAAGGCAGG AAATCTTGAT CGCGAAAACA TTTAATTTCT ACGATTACAT GTTATTCCAG CGTCTCGCTT TCCATTCTGG TAACCAGATT TACGGTTTGA TCTTTAACGG GTTGAAAAAG CTGTATGACC GTGTGGGAAG TTACTATTTT TCCAATCCTC AAGCGCGTGA ATTGGCCATG GAATTCTACC GTCAGTTGTT AGCTGTGTGC CAAAGCGGCG AGCGTGAGCA TTTGCCTCAG GTTATTCGTC AGTATGGTAT TGCTAGCGGA CACATCTGGA ATCAGATGAA AATGACGCTG CCGTCCAATT TTACTGAAGA CGATTGCTAA
|
Protein sequence | MVIKAKSPAG FAEKYIIESI WNGRFPPGSI LPAERELSEL IGVTRTTLRE VLQRLARDGW LTIQHGKPTK VNQFMETSGL HILDTLMTLD AENATSIVED LLAARTNISP IFMRYAFKLN KESAERIMIN VIESCEALVN APSWDAFIAA SPYAEKIQQH VKEDSEKDEL KRQEILIAKT FNFYDYMLFQ RLAFHSGNQI YGLIFNGLKK LYDRVGSYYF SNPQARELAM EFYRQLLAVC QSGEREHLPQ VIRQYGIASG HIWNQMKMTL PSNFTEDDC
|
| |