Gene VC0395_A1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1487 
Symbol 
ID5136421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1597013 
End bp1597363 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content48% 
IMG OID640532945 
Producthistidine triad family protein 
Protein accessionYP_001217430 
Protein GI147674459 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.194182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAAG AAACCATTTT CAGCAAAATC GTTCGTAGAG AGATTCCCGC TGATATTCTT 
TATCAAGATG AGTTGGTCAC TGCATTTCGA GACATTCATC CGCGCGCGCC AAGCCATATT
TTGATCATCC CCAATAAGCT CATCCCAACG GTCAATGATG TTGAAGTTGA AGATGAATTA
GCACTCGGTC GGCTGTTTAC TGTCGCCAAA AAAATCGCTG AGCAAGAAGG GATCGCCGAA
AACGGCTACC GCTTGATCAT GAACTGCAAC TCACACGGGG GTCAGGAGGT CTATCACATC
CATATGCATT TGGTGGGTGG TCGTCCGCTT GGGCCGCTTT TGATGGGTTA A
 
Protein sequence
MAEETIFSKI VRREIPADIL YQDELVTAFR DIHPRAPSHI LIIPNKLIPT VNDVEVEDEL 
ALGRLFTVAK KIAEQEGIAE NGYRLIMNCN SHGGQEVYHI HMHLVGGRPL GPLLMG