Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1487 |
Symbol | |
ID | 5136421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1597013 |
End bp | 1597363 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640532945 |
Product | histidine triad family protein |
Protein accession | YP_001217430 |
Protein GI | 147674459 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.194182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGGAAG AAACCATTTT CAGCAAAATC GTTCGTAGAG AGATTCCCGC TGATATTCTT TATCAAGATG AGTTGGTCAC TGCATTTCGA GACATTCATC CGCGCGCGCC AAGCCATATT TTGATCATCC CCAATAAGCT CATCCCAACG GTCAATGATG TTGAAGTTGA AGATGAATTA GCACTCGGTC GGCTGTTTAC TGTCGCCAAA AAAATCGCTG AGCAAGAAGG GATCGCCGAA AACGGCTACC GCTTGATCAT GAACTGCAAC TCACACGGGG GTCAGGAGGT CTATCACATC CATATGCATT TGGTGGGTGG TCGTCCGCTT GGGCCGCTTT TGATGGGTTA A
|
Protein sequence | MAEETIFSKI VRREIPADIL YQDELVTAFR DIHPRAPSHI LIIPNKLIPT VNDVEVEDEL ALGRLFTVAK KIAEQEGIAE NGYRLIMNCN SHGGQEVYHI HMHLVGGRPL GPLLMG
|
| |