| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1453 |
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| Symbol | |
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| ID | 5135092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1554913 |
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| End bp | 1555695 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532911 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | YP_001217396 |
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| Protein GI | 147674527 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000000402633 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACCAA CAACCCGTAA TCCAACTCAG GGAACGAGTC ATATGCTGGA TTTACAAGGC
TATGAAGCCT CTATTCTGAA AGGCGCGCTG CTGACTATTG AAATTGCCGT GCTGTCACTT
TTGCTAGCGA TGCTGCTAGG CATGTTAGGC GCACTCGCTA AAATGGCACC CTACCGCTGG
GCTCGAGCCA TTGCGACACT CTATACCACC ATCATTCGCG GTATTCCGGA TTTAGTACTC
ATGATGCTGA TTTTCTTTGG TGGGCAGATT TTACTCAACA ATGGTCTCAG TTGGTTTAAT
GAGTTCATCA ACCAATGGCT GACAGCCCGA GATCCGAATC ATGAATGGGT AGCCTATCTG
CCCGATTATG TAGATATCAG CCCTTTTGTC GCGGGCGTGT TAACCATCGG CTTCATTTTT
GGGGCTTATA TGGCGGAAAC GTTTCGTGGC GCGATCCTTG CCGTGGATAA AGGTGAACTC
GAGGCGGCGA AAGCTTACGG CATGAGTGCT GCCATGAGCT TTCGGCGAAT TTTATTACCG
CAGATGATTC GCCATGCTAT TCCTGGTTTT GGCAATAACT GGCTGGTGCT GCTGAAAACG
ACCGCTCTTG TCTCAATCAT CGGCCTTGAA GATATGGTAC GCATCAGTTC ACTGGCGGCT
GGCTCGACCA AGATGCCGTT TACCTTTTAT ATGGCGGTGG CCATCATCTT TCTATTTTTT
ACCAGTGTGT CGACCGGTTT GCTCAAGCTG CTAGAACGTA AATTCAGTAT TCATACGAGG
TAA
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| Protein sequence | MSPTTRNPTQ GTSHMLDLQG YEASILKGAL LTIEIAVLSL LLAMLLGMLG ALAKMAPYRW
ARAIATLYTT IIRGIPDLVL MMLIFFGGQI LLNNGLSWFN EFINQWLTAR DPNHEWVAYL
PDYVDISPFV AGVLTIGFIF GAYMAETFRG AILAVDKGEL EAAKAYGMSA AMSFRRILLP
QMIRHAIPGF GNNWLVLLKT TALVSIIGLE DMVRISSLAA GSTKMPFTFY MAVAIIFLFF
TSVSTGLLKL LERKFSIHTR
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