| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1452 |
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| Symbol | |
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| ID | 5136456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1554233 |
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| End bp | 1554910 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532910 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | YP_001217395 |
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| Protein GI | 147674940 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000000068563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTTT CTCTGATTAT CGACAGTTTG CCTATTTACC TAAGTGGACT TTGGACCACT
GTCTGGCTAG TGAGCCTTTC ACTCGTAATC GGCTTGCTGT GCGCCATTCC GCTGGCGATT
GCCCGAAATA GCAAGCAAAA ATGGTTTAGC CTTCCGGCAT GGGGATACAT CTATTTTCTG
CGTGGAACGC CACTCTTAGT GCAGCTTTAT CTGATTTATT ACGGTATGGA TCAGTGGTTT
CCGGTCAAAG ATACTTTATG GGAGCATGCT TGGTTCTGTG CTTTGGTGGC CTTTATCTTA
AATACCTCGG CCTATACGGC GGAAATTATC CGTGGGGCGA TCAACGGGCT TCCGAAAGGC
GAGGTGGAAG CCGCCAAAGC TTATGGTATG AGCCGTTTTC AAACTTACCA AAGAATTATT
TTACCTAGTG CGCTGCGTCG TTCCTTACCT GCTTACAGTA ATGAAGTGAT TTTTATGCTG
CATGGCAGTG CCGTGGCAGG GATCGTCACC ATCATGGATT TGACTGGCGC GGCACGATTA
GTCAATTCTC GATACTATGC GCCATTTGAA GCTTTTTTGA GTGCAGGGCT GTTTTATATG
GCGCTGACTT TCATCATTTT GTGGTGTTTT AAACAGGCGG AACAACGTTT TCTTGCCTAC
CTAAAACCTC GCAGCTAA
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| Protein sequence | MDFSLIIDSL PIYLSGLWTT VWLVSLSLVI GLLCAIPLAI ARNSKQKWFS LPAWGYIYFL
RGTPLLVQLY LIYYGMDQWF PVKDTLWEHA WFCALVAFIL NTSAYTAEII RGAINGLPKG
EVEAAKAYGM SRFQTYQRII LPSALRRSLP AYSNEVIFML HGSAVAGIVT IMDLTGAARL
VNSRYYAPFE AFLSAGLFYM ALTFIILWCF KQAEQRFLAY LKPRS
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