| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1450 |
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| Symbol | |
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| ID | 5137610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1551050 |
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| End bp | 1553170 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532908 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001217393 |
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| Protein GI | 147673173 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000571496 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCAAA TTTCTGTTCA GTGGAAAATC ACACTACTTG CGGGGCTTTG TCTGGTTTTT
ACTTCTCTCG CTTTAATCGG TTTTTCAATC TACAACGCGC GTGCGAGCCA GCAAACCGCC
AAGCTGCAAA GTTCGGAGTC TGTCATTGAT AAATCACAGC AACTGCTGCA AACCGGTGCT
TTATTGAACG CGACAGAGAT TTCAGAGTAC CTCAGTGAAG CGATATATCG TGCGGAAATG
TTGGCCGCGA ATGCTCTGTT TTTGAAAAAT AATTCAGAAG AAAACTTCGG TGAAAGTGAG
GTGTTACGCA CGTCGCTTGA TGAAATGGTG CGTAAATCCG TACTTGGCTT TGACACCATA
GAAGGCGCTT ATCTGGTATT TCGTCCCAAT ATGCTCGACA GTGAAGATTC CAATTATGTT
AATGCAGATT ATGTTGGCTC AAACGATATT GGTCAGTTTG CCGCCTACTG GACCAAGGCG
GCAAATGGGC AAAACGTGAT TTCCCGCGTA TTAACTCAAG CGCAACTCAC AGAAGAATCG
AATAAGGAGC GTTTTGTCTG CCCGATTGAG CAAGCATCGC CCTGTATTAC ATCGCCGCGC
ATGGTGGAGT TTGAAACGGG ACGCTATCTG GCCACGTCGC TGTCTGTGCC GATTTTGATT
GATGGTGTCG CCATCGGCTT TTATGGCATT GATCTGACGC TCGCGCCTTT GATTGGTATC
ACTCAAAAAT CCGATAACAA CCTGTTTGAT GGACAAGGTA AAGTGTCGAT TGTCAGTGAA
AACAATGCGT TAGTGGCGAG TGATGCTGCT TTTTTAACCC TTGGCGAAAC TTTTCAAAGC
GAGAACCTCA GCCGCTCAAC GGTGAGTTCA TTGTTGCAGG CTGGGCAAGT CAACACTCAA
TGGAGTGAAG ATGGACAATG GTTAGTGGTT TTTGCTCCTA TCAAAGTGGC GAATCAAAAC
TGGGGTATCA TTTTTGAAAT GCCACGTCAA AGTGTCATGC AAGATGCCGA ACAACTGGAC
ATTTTACTTA CAGAACAACT TGAGCGCGGC ATTCGTAGTG AATTGATGGT GGGTACGCTT
ATGGTCGTCG TGGGGCTATT GGTGGTCGCT CTTATGGCGA TGCGTTTGGT GAGACCAATT
CGAGCGGTTG CTGAACGATT ACAAGATATT TCCTCTGGTG AAGGGGATTT AACTCAGCGT
TTGCAGGTGA ATTCTGCCGA TGAAATTGGC CAACTGGCAC AGGGCTTTAA CCTTTTTATG
GATAAGTTAC AGCCGATCAT CCGCCGAGTT GTGGATAATA CGGGACAAGT CGTGAGTACC
ACCGAGCAGG TCAAAAGTAC GGTTGAATCA ACGCGCCGTA GCAGCGAAGC GCAATTTAAA
GAAGTCGACA GTGTGGCAAC CGCCGCAGAG GAGATGACTC AAACCTCAGC ACATGTTGTC
GAGAATGCTC AGCGTGCGGT GAATGCGGCG AGCGATGCTC AGCGAGCTGC CCAAACAGGG
GATGAAGTGA TCCGCCATTC ACAGATGCAG ATGAACCAGT TGGTGGACAG AATGAATCTT
GCCGTTCCTG TCGTGGAAGA GTTAGCACGC AACAACACTG GGATTATTGA AATCTTAAGT
GTGATTGAAG GCATTTCAGA GCAAACCAAC TTGCTTGCAT TAAATGCGGC GATTGAAGCG
GCTCGAGCTG GAGAGCAAGG CCGCGGTTTT GCTGTTGTTG CCGATGAAGT GCGCAGCCTT
GCTAGTCGTA CTCAAGCTTC TGTTGGTGAA ATTCGGTCCG TTATCAACAA AGTTGAATTG
GGTACGCAAG ATGTCGTGAA AGCGATTCAA GGCAGCAATG AAACCGCACA AGCTACGGCA
GAGCAAGTCG CGGATGCAGT TACTCAGCTC AACCGAGTGT TTTCGGCGAT TCATGCCATC
AACGAGATGA GTCATCAAAT CGTGCAAGCT GCGCAAGATC AGCAGACGGT ATCGGCTCAA
GTGACTCAAA GCGTGGTCAA TATTCGCGAT TTAAGTGCGC AAATTCTTTC AGAAACGGAA
GCATCCGAAA AAGTGGGAGA GCAAATTGCG CGGTTGTCGT TTGAACAACA AACTCTCGTC
GGGCAGTTTA AAGTGAACTG A
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| Protein sequence | MRQISVQWKI TLLAGLCLVF TSLALIGFSI YNARASQQTA KLQSSESVID KSQQLLQTGA
LLNATEISEY LSEAIYRAEM LAANALFLKN NSEENFGESE VLRTSLDEMV RKSVLGFDTI
EGAYLVFRPN MLDSEDSNYV NADYVGSNDI GQFAAYWTKA ANGQNVISRV LTQAQLTEES
NKERFVCPIE QASPCITSPR MVEFETGRYL ATSLSVPILI DGVAIGFYGI DLTLAPLIGI
TQKSDNNLFD GQGKVSIVSE NNALVASDAA FLTLGETFQS ENLSRSTVSS LLQAGQVNTQ
WSEDGQWLVV FAPIKVANQN WGIIFEMPRQ SVMQDAEQLD ILLTEQLERG IRSELMVGTL
MVVVGLLVVA LMAMRLVRPI RAVAERLQDI SSGEGDLTQR LQVNSADEIG QLAQGFNLFM
DKLQPIIRRV VDNTGQVVST TEQVKSTVES TRRSSEAQFK EVDSVATAAE EMTQTSAHVV
ENAQRAVNAA SDAQRAAQTG DEVIRHSQMQ MNQLVDRMNL AVPVVEELAR NNTGIIEILS
VIEGISEQTN LLALNAAIEA ARAGEQGRGF AVVADEVRSL ASRTQASVGE IRSVINKVEL
GTQDVVKAIQ GSNETAQATA EQVADAVTQL NRVFSAIHAI NEMSHQIVQA AQDQQTVSAQ
VTQSVVNIRD LSAQILSETE ASEKVGEQIA RLSFEQQTLV GQFKVN
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