| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1439 |
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| Symbol | cysS |
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| ID | 5136878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1540378 |
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| End bp | 1541757 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532897 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_001217382 |
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| Protein GI | 147673703 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000326973 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGAAGA TTTATAACTC ACTCACAAGA CAGAAAGAGG AATTTAAACC AATCGTTGCC
GGCAAAGTGG GCATGTATGT GTGTGGAGTC ACTATTTATG ATCTCTGTCA TATCGGACAT
GGGCGTACAT TTGTTTCATT TGACGTAGTA GCTCGTTATC TTCGTTACCT TGGCTACGAT
CTTACCTTTG TGCGTAATAT CACCGACATC GATGACAAGA TCATCAAGCG TGCTGCAGAA
AACGCAGAAA CGTGCGAATC ATTGACAGAA CGCTTGATTC AAGAAATGTA TGCGGATTTC
GATGCCCTGA ATATCAAACG TCCCGATGTT GAACCACGTG CGACGGCTTA TATCGAAGAG
ATCATTGCTC TGGTTGAGCG CCTGATTGAG CGTGGTTTTG CTTATGTTGC TGATAACGGT
GATGTGATGT TTGAAGTGAG CCAATACAGC GAGTACGGTA AACTTTCCAA GCAAGATCTT
GATCAACTCC AAGCGGGAGC ACGTGTGGAT ATCGAAGCGG CAAAACGCAG TCCGCTGGAT
TTCGTGCTCT GGAAAATGTC GAAACCGGGT GAACCAACAT GGGAATCCCC TTGGGGCTCT
GGCCGTCCGG GCTGGCACAT CGAGTGTTCA GCGATGAACT CATCAATTTT GGGTACCCAT
TTCGATATCC ACGGTGGTGG TTCTGACTTG CAATTCCCAC ATCATGAAAA CGAAATTGCG
CAATCTTGCT GCGCCCATGA TACCCAGTAC GTCAACACTT GGATGCACAG TGGTATGGTG
ATGGTAGATA AGGAGAAGAT GTCGAAATCA CTCGGTAACT TCTTCACTAT CCGCGATGTT
TTGGGCCATT ATGATGCAGA AACAGTGCGT TATTTCTTGA TGTCAGGCCA CTACAGAAGC
CAATTAAACT ACAGTGAAGA GAATCTCAAT CAAGCACGTG CTTCACTAGA GCGACTCTAT
AACGCACTGC GTGGTTTAGA TCGTAGCGTG CCAGCCGCGG GGGGCGAAGA GTACGTGACG
CGCTTTACTG CTGCTATGAA CGATGATTTC AATACGCCAG AAGCGTATTC GGTGCTGTTT
GATATGGCTC GTGAAATCAA CCGACTCAAG AGTGAAGATA TGACCAATGC GAGCGCTTTG
GGCAGCTTAA TGCGTGAGTT GGCAGATGTG ATCGGTATTC TTTACCAAGA GCCTGAGGCT
TTCTTCCAAG GTAGTGCGGA AGATGAAGAT GCGGCGCAAA TTGAAGCTTT AATCAAGCTA
CGTAATGATT CTCGTGCGAC GAAAGATTGG GCTAATGCTG ACTTGGCGCG TGATAAGTTA
AACGAAATGG GAATTGTGCT TGAAGATGGA CCTAATGGTA CAACTTGGCG TCGTAAGTAA
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| Protein sequence | MLKIYNSLTR QKEEFKPIVA GKVGMYVCGV TIYDLCHIGH GRTFVSFDVV ARYLRYLGYD
LTFVRNITDI DDKIIKRAAE NAETCESLTE RLIQEMYADF DALNIKRPDV EPRATAYIEE
IIALVERLIE RGFAYVADNG DVMFEVSQYS EYGKLSKQDL DQLQAGARVD IEAAKRSPLD
FVLWKMSKPG EPTWESPWGS GRPGWHIECS AMNSSILGTH FDIHGGGSDL QFPHHENEIA
QSCCAHDTQY VNTWMHSGMV MVDKEKMSKS LGNFFTIRDV LGHYDAETVR YFLMSGHYRS
QLNYSEENLN QARASLERLY NALRGLDRSV PAAGGEEYVT RFTAAMNDDF NTPEAYSVLF
DMAREINRLK SEDMTNASAL GSLMRELADV IGILYQEPEA FFQGSAEDED AAQIEALIKL
RNDSRATKDW ANADLARDKL NEMGIVLEDG PNGTTWRRK
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