Gene VC0395_A1431 details

Gene Information

• Locus tag: VC0395_A1431
• Symbol: tolR
• ID: 5137375
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 1532678
• End bp: 1533118
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640532889
• Product: tolR membrane protein
• Protein accession: YP_001217374
• Protein GI: 147673277
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0848] Biopolymer transport protein
• TIGRFAM ID: [TIGR02801] TolR protein

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 2.87088e-16
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGGCT ATCAAACCAA AAAACGTGAG ATGAAAGCAG AGATTAACGT GGTTCCTTAC 
ATCGACGTTA TGCTGGTTCT CCTCATTATT TTTATGGTGA CATCACCGTT TGTAACACAA 
GGTGTGGATG TGGAGTTGCC GAAAACTCAT TCGGCTAAAT CAGCACAAGA TCTAGCGGGT 
GATAGCGATT CTAGCTTTAT CATTGTTGAG ATTGATAAAG AAGGTAATCT TGGCCTGAGT 
GTTAATGATG AAGAAGTTCA ACGCGGTCTA TCCATCGAAG ATGTGATTGT TCGAGTGAAA 
GCAGAATTGT CTCTTAAACC TAATTCACCT GTGGCCGTGG GTGGCGATGC CGCTACACCT 
TACGCAGAGA TTGTTTTGGT ATTGGATGAG TTGGGTCAAG CTGGTATTCC TAAAGTAGGG 
CTACTCACGG ACCTTAAATA A 

 

Protein sequence

MAGYQTKKRE MKAEINVVPY IDVMLVLLII FMVTSPFVTQ GVDVELPKTH SAKSAQDLAG 
DSDSSFIIVE IDKEGNLGLS VNDEEVQRGL SIEDVIVRVK AELSLKPNSP VAVGGDAATP 
YAEIVLVLDE LGQAGIPKVG LLTDLK