| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1428 |
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| Symbol | pal |
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| ID | 5136689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1529673 |
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| End bp | 1530191 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532886 |
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| Product | peptidoglycan-associated lipoprotein |
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| Protein accession | YP_001217371 |
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| Protein GI | 147673661 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000000158382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACTTA ACAAAGTTCT TAAGAGTCTG CTGATTGCGC TACCAGTTTT AGCTGTTACC
GCTTGTAGCT CAAGTGATGA TGCTGCGAAC TCAGGTTCTC AAACTAACCA ATCAGCAGTG
TCTACTGTTG ACTCAAATGG TCTGAATGCA CAAGGTCAAC TGACTGAGCA AGAACTGAAA
GAACAAGCTC TGCGTGAAAA CCAAACTATC TACTTCGCAT TCGACAACGC AACTATCGCG
AGCGACTACG AAGCAATGCT AGCTGCACAC GCTGCTTACC TAGTGAAAAA CCCAAGCCTA
CGCGTAACTA TCGAAGGTCA CGCTGATGAG CGCGGTACTC CTGAGTACAA CATCGCACTG
GGTGAGCGTC GTGCTCAAGC AGTTGCTAAG TACCTAGAAG CTCTGGGTGT TCAAGCTGGC
CAACTGTCTA TCGTTAGCTA CGGTGAAGAG AAGCCTCTAG TTCTAGGTCA ATCAGAAGAA
GCGTACGCGA AAAACCGTCG TGCAGTTCTG GTTTACTAA
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| Protein sequence | MQLNKVLKSL LIALPVLAVT ACSSSDDAAN SGSQTNQSAV STVDSNGLNA QGQLTEQELK
EQALRENQTI YFAFDNATIA SDYEAMLAAH AAYLVKNPSL RVTIEGHADE RGTPEYNIAL
GERRAQAVAK YLEALGVQAG QLSIVSYGEE KPLVLGQSEE AYAKNRRAVL VY
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