Gene VC0395_A1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1407 
Symbol 
ID5135148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1506759 
End bp1507232 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content47% 
IMG OID640532866 
Producthypothetical protein 
Protein accessionYP_001217351 
Protein GI147673789 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA TTGCCATTTT GGTGGATGTA CAAAACGTGT ATTACACCTG CCGCGAGCAA 
TATGGCCGGC ACTTTGATTA CAATCAGTTT TGGTCGCAAG TGACGCAAAA TCGCACGGTA
GTGAAAGCCA ATGCCTATGC GATTGCCAGT AAAGATCCGC AGCAGAGGCA ATTTCATCAT
ATTTTACGAG GGATTGGCTT TGAGGTGATG CTAAAACCTT TTATCCAGCG CAGTGATGGT
AGCGCGAAAG GGGATTGGGA TGTCGGGATT GCCCTTGATG GCTATGAATT AGCTCAGGAG
GTAGACACCG TGGTGCTCGT TTCTGGGGAT GGTGATTTTG AACCTTTGGT GACCAGAATT
GCGCAACGCT TTCAGGTTAA GGTGGAAGTG TATGGCGTGC CGAAACTGAC CGCGCAACAT
TTAATCGATG TCGCCAGTCA ATTTCACCCG ATTGAGCATC GTCTATTACT GTAA
 
Protein sequence
MEKIAILVDV QNVYYTCREQ YGRHFDYNQF WSQVTQNRTV VKANAYAIAS KDPQQRQFHH 
ILRGIGFEVM LKPFIQRSDG SAKGDWDVGI ALDGYELAQE VDTVVLVSGD GDFEPLVTRI
AQRFQVKVEV YGVPKLTAQH LIDVASQFHP IEHRLLL