Gene VC0395_A1364 details

Gene Information

• Locus tag: VC0395_A1364
• ID: 5135290
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 1461989
• End bp: 1463980
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640532822
• Product: hypothetical protein
• Protein accession: YP_001217307
• Protein GI: 147675278
• COG category: [S] Function unknown
• COG ID: [COG1479] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTGATC ATTTATCGGT GCAAACTGAG CTTCTGACGC TTGAGAAAAT CTACACCGAC 
AACTACCAGT TCTCTATTCC CAGCTATCAA CGTCCTTATG TCTGGTCAGA TGATGATGTC 
TTGCTGCTGT TCAGAGATAT TAAAGAAGCG TGTCGATTAA AAGAGCCAAA CTACTTTATC 
GGCACCATCC TGTCGTCTCG CATTGAACAA GATGGAGAGC GGATCTATGA GTTGATCGAT 
GGTCAGCAAC GCACGACAAC GCTAATGCTC ATGACCATTG CTTTCAAGTA CGCAGGCATT 
AAATCCGATC TTGCAGGGCT TGCTGTTTAT ACATCGAGTG ATGGTGAAGA TAAGCCACGT 
CTCCAATTTT CAATTCGTGA GCAAGTTCAG CAGCTTTTAG GTGGTCTAGC GGGGCTTAAG 
AACTATCAAG TGCCGTCTAA GGAAACGATC GCTGACAATG CTTATTTGAA ACAGATGGGC 
GTGGCGTTAG ACGTATTGAC CAAAGAAGTA GAGAAGCTCA AATCAGACGA TGGGGTGAGC 
GCCGAAGCTA TGGGGGATTA CCTCTACCGC CAAGTTCAAT GGGTAAATAA CATTGTGCCA 
ACACAAATGG ACTTAAACCG ATTGTTTGCC ACCATGAATA CCGCTGGCAT TCAATTAGAA 
CAAGCGGACA TTCTAAAGGC GAAGCTGTTC AAGCATATCC ATACTGACAA AGCACAGTAT 
GATGCAATGT GGGTGGCGTG TGAGCATCTG GAAAACTATT TTGAACGCAA TGTACGCAAA 
GTATTTCCTA ATGCGGATTG GTACCATATT GAACCCGAAC ATTTGGCGTC TTTTGATGCT 
GAACGTTTCG CTGCAAAAGA TGAAACGTCA GAGGCGTTGT CTGGCTTGTC GATTGCTGAG 
CTAGCGTCAC AAGTTAAAGC AAGTTCAATT CCTGATAACA CCGAGCAAGA GAAGTTTGAA 
ACTTACGACT TGGACGTTGA AACAGTTTAT TGTCGCCCGA TCATCAAGTT CCCGCTGTTA 
TTGATTCACG CTTATCGAGT CTACTTAGCG CTTAATGATC ATAATGATAT TGAACCACGT 
CTGCATAGCG ATCGCTTGTT GGAGATATTC GACCCACTTA TCAACGGTGA TGAGCAATCG 
GTAAAGCTGT TTATTGAAAC GCTATGGCAG GTTCGCTACC AGTTTGACCG TTGGGTTGTA 
AAATGGGTTG AATGTGATGA TGCGACAGAT GCGCAGCTCG GCTTAACGTA TCAATCTCGC 
AGCAAGTCGA ATGACACTTA CTACATCAAC CGAACGCAGA AAGAGCTGAC GGATATTGTG 
CTTTTGCAAA GTGTTCGCAA CTTTACCGGT GAGCGCAGCG CCCAGTATTG GTTAACACCA 
TTTCTTTCAG GCTTGATCCG TTCGAGTATC AAGCAAGACT CTGTCGCGTT AGAGCTACTA 
GAAAACATTG ACAACAAAAT GTCATTGTCT GTTGATACTC AAAAAGAGGC CAGCTTTGCA 
CTCGCTGAAG GCATAGAGCC AAACTGCCAG AGTTGGCAAT CTCAATCGAC ATATTTTGCA 
AAGTCGTTAG GTACGAGCTT TGAGCATTAC TGGTTTCAAA AACTTGAATA TTTGATTTGG 
AAGAAAATGA AGGCGTCAGA ATCTTCATTG CCTTCTGAAG AATTGAATAA GTTTAAAAAG 
TACCGGATTA CATCCAAAAA CTCAGTAGAA CATGTTCATC CTCAAAATGA TGAGTATAAC 
AGTAGGTTAG ACTGTGAAAC GTTAAACTCA TTTGGAAATC TAGTGCTACT GAGTCCAGGT 
GAAAACTCGT CTTATAGCAA TCAAGATGTT GACAAGAAAC GCATCGACTT CGAGAGAAAA 
TCCCACTTTG ACGCACTGAA ATTAAGAGAG ATATTCGGTG TGAAAGGTCA GGGACTGTGG 
GGCAAACAGC AGATAGATAA CCATCTAGAA GACATGATGG CAGTATTTGC TCAGCACTAT 
AAACATCAAT AA 

 

Protein sequence

MGDHLSVQTE LLTLEKIYTD NYQFSIPSYQ RPYVWSDDDV LLLFRDIKEA CRLKEPNYFI 
GTILSSRIEQ DGERIYELID GQQRTTTLML MTIAFKYAGI KSDLAGLAVY TSSDGEDKPR 
LQFSIREQVQ QLLGGLAGLK NYQVPSKETI ADNAYLKQMG VALDVLTKEV EKLKSDDGVS 
AEAMGDYLYR QVQWVNNIVP TQMDLNRLFA TMNTAGIQLE QADILKAKLF KHIHTDKAQY 
DAMWVACEHL ENYFERNVRK VFPNADWYHI EPEHLASFDA ERFAAKDETS EALSGLSIAE 
LASQVKASSI PDNTEQEKFE TYDLDVETVY CRPIIKFPLL LIHAYRVYLA LNDHNDIEPR 
LHSDRLLEIF DPLINGDEQS VKLFIETLWQ VRYQFDRWVV KWVECDDATD AQLGLTYQSR 
SKSNDTYYIN RTQKELTDIV LLQSVRNFTG ERSAQYWLTP FLSGLIRSSI KQDSVALELL 
ENIDNKMSLS VDTQKEASFA LAEGIEPNCQ SWQSQSTYFA KSLGTSFEHY WFQKLEYLIW 
KKMKASESSL PSEELNKFKK YRITSKNSVE HVHPQNDEYN SRLDCETLNS FGNLVLLSPG 
ENSSYSNQDV DKKRIDFERK SHFDALKLRE IFGVKGQGLW GKQQIDNHLE DMMAVFAQHY 
KHQ