| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1322 |
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| Symbol | torR |
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| ID | 5136370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1410635 |
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| End bp | 1411339 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532780 |
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| Product | DNA-binding transcriptional regulator TorR |
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| Protein accession | YP_001217266 |
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| Protein GI | 147675661 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000612091 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTATC ACGTACTTGT GGTTGAAGAT GACCTCGTCA CGCGAAGTAA GTTAAGTGGT
TACTTTCAAA ATGAAGGTTA CCAAGTGACG GAAGCAGAAA GTGGCGCACA GATGAGAGAA
GCGTTAGAGC TCAATGACAT CGATCTGGTT TTGCTGGACA TTAATTTGCC CGGTGAAGAC
GGTCTGTTAT TGACGCGAGA ATTGCGCAGC CAGTCGGAGA TTGGCATTAT TTTAGTGACA
GGACGCACCG ACAGTATCGA CAAAATCGTT GGCCTCGAAA TGGGCGCGGA CGATTATGTC
ACCAAACCTG TTGACCTACG CGAGCTTCAG GTTCGTGTAA AAAACTTATT ATGGCGAATT
TCCCTCGCAC AGCGAGAGAG AATTACCGAC AAACACGATG ACAAACTGGT GCATTTTGGT
GAGTGGACGT TCGATGTTCA GCGCCGTGCA TTAAGCCGTA ACGGTGAGCC AGTCAAGCTC
ACTAAAGCGG AATACGAGTT GTTGGTTGCG CTTTCTTCTT ATCCTAATCA AGTGATGAGT
CGTGAGCGGA TTTTGAACAT GATCAGTCAC CGTGTGGATG CGCCAAACGA CCGTACGATT
GACGTATTGA TCCGCCGTAT GCGCGCCAAA ATGGAAATGG ATCCGAAAAA CCCGCAAATC
TTTGTGACGG TTCACGGCGA AGGGTACATG TTCGCTGGGG ATTAA
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| Protein sequence | MSYHVLVVED DLVTRSKLSG YFQNEGYQVT EAESGAQMRE ALELNDIDLV LLDINLPGED
GLLLTRELRS QSEIGIILVT GRTDSIDKIV GLEMGADDYV TKPVDLRELQ VRVKNLLWRI
SLAQRERITD KHDDKLVHFG EWTFDVQRRA LSRNGEPVKL TKAEYELLVA LSSYPNQVMS
RERILNMISH RVDAPNDRTI DVLIRRMRAK MEMDPKNPQI FVTVHGEGYM FAGD
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