| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1309 |
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| Symbol | metR |
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| ID | 5137522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1390800 |
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| End bp | 1391717 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640532767 |
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| Product | transcriptional activator MetR |
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| Protein accession | YP_001217253 |
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| Protein GI | 147673038 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00130868 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAGC TGAAACATTT GAAAACGCTG ATCTCGCTAC GCGATACCGG TTCACTGACC
GCCACCGCGA CCTCGTTGCA TCTCACCCAG TCTGCGCTCT CGCATCAGAT TAAAGACTTG
GAAGCGCGAA TTGGCGGGCA GCTTTTTTTG CGTAAAACAC GCCCAGTGCG TTTTACCGCC
GAAGGCGAAA TTTTGCTGCG TTTGGCGGAC GATATTTTGC CTAAGATGTC GCGCGCCGAG
AATGAACTGG CAAGCCTTAA AGAAGATGTG AATGGACGCC TGCACATGGC GATTGAGTGC
CACTCCTGCT TTCAATGGCT AATGCCCGCC CTGCGCGAAT ATCAGGTCAG CTGGCCAAAT
GTGGCGCTGG ATTTTTCATC CGGCTTTGGG TTTGAGCCTC TACCCGCGCT GTTAGCGGGG
GAATTGGATC TGGTGATCAC CTCGGATATT TTGCCACGCT CAGAAGTGCA TTATGAGCCA
CTGTTTGATT TTGAAATGCG CCTTATCACC GCCACCAACC ATCCATTGGC TGACAAAGCC
GGTATTGAGC CCCAAGATTT GATCGATCAA ACCATGCTCA CCTATCCGGT GCAAAAGCAA
AGATTGGATG TGGTGAAGCA CTTTTTGCAA CCCGCAGGCG TTGAGCCCGC ACGCTGGAAG
CAAGCCGACA ATACCTTGAT GCTGGTACAA ATGGTGTCGG CAGGATTAGG TGTTGCGGCA
CTACCCAATT GGGCAATCAG CGAGTTTTCA CGCCAAGGGC TCATCACCAG TAAACCGTTA
GGTAAAGGGC TATGGCGTCG CTTGTTTGCC GCCACTCGCC ATAGCGAAAA AGACAAACGC
TACCTGCAAG CCTTTTTCGC TACCGCACGC CAACAATGCA AAAGCCACCT TGATGGGATC
AAGATGGCTT CACTTTAG
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| Protein sequence | MIELKHLKTL ISLRDTGSLT ATATSLHLTQ SALSHQIKDL EARIGGQLFL RKTRPVRFTA
EGEILLRLAD DILPKMSRAE NELASLKEDV NGRLHMAIEC HSCFQWLMPA LREYQVSWPN
VALDFSSGFG FEPLPALLAG ELDLVITSDI LPRSEVHYEP LFDFEMRLIT ATNHPLADKA
GIEPQDLIDQ TMLTYPVQKQ RLDVVKHFLQ PAGVEPARWK QADNTLMLVQ MVSAGLGVAA
LPNWAISEFS RQGLITSKPL GKGLWRRLFA ATRHSEKDKR YLQAFFATAR QQCKSHLDGI
KMASL
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