| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1289 |
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| Symbol | sapF |
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| ID | 5137811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1370705 |
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| End bp | 1371493 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532747 |
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| Product | peptide ABC transporter, ATP-binding protein |
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| Protein accession | YP_001217233 |
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| Protein GI | 147673574 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4167] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCGC TGTTAGAAGT CACCAATCTG CACAAAGACT TTGTCACTCG CTCAGGCTTT
TTACGCAAAC AGATCCAACA TGCGGTAAAG CCAGTCAGCT TTACTCTTGA AGCAGGACAA
ACCATTGGTT TTATTGGTCA AAATGGCTCA GGAAAATCTA CCCTCGCTCG CATGTTAGCG
GGGATGGTTG CACCGACCGG TGGCGAGATC CGCGTCAACG GGGAGTTGTT AGAACATAAA
GACTACTCGA CGCGCTGTAA ATTGATCCGG ATGATTTTCC AAGACCCGAA TACCTCGCTC
AATCCACGTT TACAGATTGG GACGATTCTG GAAGGGCCGC TGAAACGAAA TACCAGCATG
ACACCTGAAG CGCGAATGCG CCGTGTAAAA GATACGTTGC AACGTGTCGG TTTACTGCCA
GAGCATGCTT ACTTCTATCC GCAGATGCTG GCGACTGGAC AAAAACAGCG TGTCTGCTTG
GCTCGTGCGC TCATCTTACA GCCTTCCATC ATTATTGCCG ATGAGGCGTT GAACGGTCTG
GATATGGCGA TGCGCTCGCA AATCCTCAAT CTGTTTTTGG AACTGCAAGA AGAGATGGGC
GTCTCCTTTG TGTATGTATC CCAGCATATC GGAGTGATCA AGCACATCAC TGACAAAATC
ATCGTCATGC ATGAAGGAGA CGTGGTCGAA GCGGGGGAAA CTCACGAAGT GTTGGCGGAT
CCTCAGCATC CCATCACCCA ACGCATGATT GAGAGCCACT TTACCAAGGC TCCCACCTTT
AAGTATTGA
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| Protein sequence | MSALLEVTNL HKDFVTRSGF LRKQIQHAVK PVSFTLEAGQ TIGFIGQNGS GKSTLARMLA
GMVAPTGGEI RVNGELLEHK DYSTRCKLIR MIFQDPNTSL NPRLQIGTIL EGPLKRNTSM
TPEARMRRVK DTLQRVGLLP EHAYFYPQML ATGQKQRVCL ARALILQPSI IIADEALNGL
DMAMRSQILN LFLELQEEMG VSFVYVSQHI GVIKHITDKI IVMHEGDVVE AGETHEVLAD
PQHPITQRMI ESHFTKAPTF KY
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