| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1280 |
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| Symbol | |
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| ID | 5137250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1362415 |
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| End bp | 1363446 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532738 |
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| Product | putative multidrug resistance protein |
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| Protein accession | YP_001217224 |
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| Protein GI | 147673434 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAA CCCTTTTGGC CTTTTCCATC TGCTCCACTT TGCTGGTGGG GTGTGGAAAA
GAGCTTCCTC CCGTGCCTGA GCCCGATTCG CGGCCAGCTA AATTGACGAC TGTGTCCGTA
GGTAACAACA CCTTTTCTCG CCAATTTCCA GCCACTACGG CGGCTGGCGA TCGCGCGGTG
CTCGCTTTCC GTGTACCCGG ACAACTACAA ACCATTGATG TTTTAGCCGG ACAAGAGGTG
AAGAAAGGTG AGGTACTTGC CAGACTCAAC CCTGACGAAT ATGCGTTGTT AGAACAGCAA
GCCAACGCCA ATTTTCAATT AGCCGATGTG CAATTTCAGC GGGCACAGCG ATTACGCCAA
GACAAAGTCG TGTCCGAGCA GGATTTCGAC CAAGCTCAAG CCAATCACAA TTCCGCGAAA
GCCACCTGGG AACAAGCCAA AGCCAATCTG CGTTATACCC AATTGATCGC CCCTTATGAT
GGCACCATTT CGCTGATCCC AGCAGAGCAG TATGAGTATG TCGCAGCCAA GCAAGGGGTG
ATGAATATTC AAACCAATCA ACTGCTCAAA GTGCAGTTTC TCCTTCCCGA TCATTTGCTT
AATCGCTTTT CTCGTGACGG TGTAGAAGCG CATATGGTGT TTGACTCGTT CCCTAACCGC
CAATATCCGC TGCAATTTCA AGAGATAGAT ACCGAGGCCG ATTCCAAAAC CCGCTCCTAT
AAAGTGACTA TGGTGATGGA AAGACCCAAT GATGTCGGCA TTTTGCCGGG TATGGCGGGA
CGTGTAAGCC TCATGGCTCC GAGTGGTAGC GCGACGGTGA TCCCCACTTC TGCATTGTTT
GCAGAGCAAG GGGGAAAATA CGTATGGCGA GTCGATGAAG CGGGGCTGGT CAGTAAAGCT
GCGGTCACTT TGAATGATCA ACGCCAAGTG CTTACAGGTT TAAATGATGG TGACCGGATC
ATTATTTCCG GTGTCAGTGG TGTGACCGAG GGCATAAAAG TGCGTGAATG GGTCAAGGAG
CGAGGACTGT AG
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| Protein sequence | MNKTLLAFSI CSTLLVGCGK ELPPVPEPDS RPAKLTTVSV GNNTFSRQFP ATTAAGDRAV
LAFRVPGQLQ TIDVLAGQEV KKGEVLARLN PDEYALLEQQ ANANFQLADV QFQRAQRLRQ
DKVVSEQDFD QAQANHNSAK ATWEQAKANL RYTQLIAPYD GTISLIPAEQ YEYVAAKQGV
MNIQTNQLLK VQFLLPDHLL NRFSRDGVEA HMVFDSFPNR QYPLQFQEID TEADSKTRSY
KVTMVMERPN DVGILPGMAG RVSLMAPSGS ATVIPTSALF AEQGGKYVWR VDEAGLVSKA
AVTLNDQRQV LTGLNDGDRI IISGVSGVTE GIKVREWVKE RGL
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