| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1262 |
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| Symbol | sdaC-2 |
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| ID | 5137823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1342035 |
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| End bp | 1343288 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532720 |
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| Product | serine transporter |
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| Protein accession | YP_001217206 |
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| Protein GI | 147674660 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.040396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAGACT CTCAGGAAGT AACCCATTTT AGTGCTGCCC GTTCCTCAAA ATGGACTCAA
CATGATACCT ATTGGTTACT GAGCTTATTC GGTACAGCAG TAGGTGCAGG GATTTTATTT
TTACCGATCA ATATTGGTTT AGGCGGATTC TGGCCGCTGG TGCTGATGGC AGTATTAGCC
TTTCCTATGA CCTATCTTTC GCATCGTGGA CTGGCGCGTT TTGTACTTTC ATCACGTCGT
CCAAATGCCG ATTTTACTGA TGTGGTCGAA GAACATTTTG GCCAAAATGC TGGCCGATTG
ATTTCCCTAC TCTATTTTTT ATCGATTTTT CCTATTCTGC TTATCTACGG TGTTGGCCTT
ACCAACACAG TCGATAGTTT CTTGGTTAAC CAAGCGGACA TGGTATCGCC GCCACGCGCA
CTACTTTCTG GTGCTTTAGT GTTTGGGCTT ATCGCTATCA TGCTCAGTGG CGAGAAAATC
ATGCTGCGCG CTTTTGCCAT CATGGTTTAT CCGCTGGCGG CGATCCTTGC CCTACTCTCG
CTGTATTTGC TCCCTTACTG GTCAATGCCT TCGTTTGATT TTCCGCAAAC CAGCGATTTC
CTGCACACTG TATGGCTGGC CGTACCGGTA GTGGTGTTCT CATTCAGCCA TGCTGCGGCC
ATTTCAAGTT TTGCCAATAT CCAGCGTCGT CATTATGGTG AACAAGCTGA TCAAAAGTCT
GAGCAGATTC TGCGCCACAC TAGCGTGATC TTAATTTTGT TTGTGTTGCT GTTTGTCTTC
TCTTGTGTAC TTGCCCTTTC GCCACAAGCA CTGCAAGAAG CCAAAGCGCA AAACGTTTCG
GTGCTGACTT ATCTGGCCAA TGTCACTGAC AACCCATTCA TCGCGACGCT CGGGCCACTG
GTCGCCTTCA TCGCCATCAC CTCTTCCTTC CTCGGCCACT TCTTAGGGGC GCGTGAAAGT
TTATCTGGCC TACTGACCAA AAACTTAGGG GTATCACTAG GTTTGGCGGA ACGTCTCACC
ATCGGCTTTT TATTTGTCAC CATCTGGATC GCTGCAATCC TCAATCCAAG CATTTTGGGC
ATGATGGAGG CGCTTTCGGG CCCAGTCATC GCAATGATTT TGTTCATCAT GCCGATGATT
GCCGTCTTCA AAGTGCCCGC CCTGCGTGAA CATCAAAAAC GTTTCAGCAC TTTCTTCGTG
TTACTGGTTG GATTGCTCGC CGTTTCGGCT TTGCTCTACA GTTTACTTCG CTAA
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| Protein sequence | MKDSQEVTHF SAARSSKWTQ HDTYWLLSLF GTAVGAGILF LPINIGLGGF WPLVLMAVLA
FPMTYLSHRG LARFVLSSRR PNADFTDVVE EHFGQNAGRL ISLLYFLSIF PILLIYGVGL
TNTVDSFLVN QADMVSPPRA LLSGALVFGL IAIMLSGEKI MLRAFAIMVY PLAAILALLS
LYLLPYWSMP SFDFPQTSDF LHTVWLAVPV VVFSFSHAAA ISSFANIQRR HYGEQADQKS
EQILRHTSVI LILFVLLFVF SCVLALSPQA LQEAKAQNVS VLTYLANVTD NPFIATLGPL
VAFIAITSSF LGHFLGARES LSGLLTKNLG VSLGLAERLT IGFLFVTIWI AAILNPSILG
MMEALSGPVI AMILFIMPMI AVFKVPALRE HQKRFSTFFV LLVGLLAVSA LLYSLLR
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