Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1243 |
Symbol | |
ID | 5135868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1316323 |
End bp | 1316730 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640532701 |
Product | hypothetical protein |
Protein accession | YP_001217187 |
Protein GI | 147674733 |
COG category | [S] Function unknown |
COG ID | [COG3212] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000000184461 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACTATGC AGATTTTTCG TATTCAGCAA AGACCGCAAG CCAGCCTCCT ACTCCTATTG TTGTTGCTAG GGTTTGCACT GCCTACTCAC GCTGATAACA AGGTGCGAGA CTGGGAACAA GGCTCGTATC GTGAAGGGAC GCAAATTGAA ATTGATGAAG ACCAAGATGA CGTTTATCGC GCCGTCCAAA AAGGGTTGAT TCGCCCTTTT GCCGAGCTCT ATGCCACGGT CGATCAGCAG TTGAATGGGC GTTTGATCAA AGTCGAGCTT GACGAAGATG ACGATGAGTG GATTTATGAG CTGAAATTGG TGTATGACAA TCAAGTCTTT CGTGTCGAAT ACAACGCCGC TACATTGGAG TTGATGTCCA TTCGCGGACG TAATGTGATT CGTGCCATCA AAAAATAA
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Protein sequence | MTMQIFRIQQ RPQASLLLLL LLLGFALPTH ADNKVRDWEQ GSYREGTQIE IDEDQDDVYR AVQKGLIRPF AELYATVDQQ LNGRLIKVEL DEDDDEWIYE LKLVYDNQVF RVEYNAATLE LMSIRGRNVI RAIKK
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