Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1225 |
Symbol | |
ID | 5136684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1285104 |
End bp | 1286321 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640532683 |
Product | putative multidrug resistance protein |
Protein accession | YP_001217169 |
Protein GI | 147675274 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAAC TGCATTCTCC TCAATATTTA AAAGTGACCT TTGCCCTCGC TTTCGGTTCA TTTTTAGTTT TCTGCAATCT TTATCTTTTC CAACCCATGC TACCTTATTT GGCGAATCAC TTTGCGGTTT CGGAAACCCA AATTAACTGG TTGTTTGCAG CTTCCACCTT AGCTTTATCA CTTTGCCTCG TGCCTTGGGC GGTCACTTCG GAAGCCGTTG GGCGACGCTT AGTGATGCTG ACCGGCTTAT TTGCTATGCC TGTGATTGGC TTAGCCATGC TTTATGCTGA GCAATTTTGG TTTTTGGTAC TCACCCGAGC TTTAATGGGC GTGGCTTTAG CGGCTTTTGC TTCGGTTGCG GTGGCGTACA TGGTGGAAGA GCTTTCTCCG CAAGCGTTTG GTAAGGCGAT TGGTGGCTAT ATCGCGGCAA ACTCATTGGG CGGTATTACC GGCCGCATTG CTGGAGGGTT ACTCACCGAT GCCCTTGGCT GGCAACATGC GGTCGTTGCG ATGGCCATTT TTACTCTGCT CGGCGCGCTT TTGGTCGCGT ATTTGCTGCC CATTCAACAG CATTTTAAAC CGCAACGTGG GCTGTTTTTC CATCACAATC GTGCGTTAGT CAAACATCTG CAAAACCGCA CACTCTGGCT AGCTATGTTG ATTGGCGGTG TTAACTTCGC ACTGTTTGTT AACCTCTATT CCGTGATGGG ATTTCGTTTA GTCGCCGAAC CCTACTCACT GCCCATAGGT ATTGCTTCAC TGATTTTCGT CTGTTATTTA GCTGGAACAC TGAGCTCAAA GCTCACCGCC AACTGGAACC GGCGTTTCTC GGCGATTCCC GGCATGATGC TTGGCGCACT CATCAGTATG GCAGGCATGT TGATTGCGTT GATTGAAGCG ATACCCGCCA TGCTGGTCGG CTTGATTTTG ATTAGCTTCG GCGCCTTTTT CACCCATACT TTGGCTTACG CTTGGGTCAG TCAAAAAGCC ACACAAGCCA AAGCCACCGC GACTGCACTT TACTTGGTTC ACTATTATAT TGGCGGTAGT TTAGGCGGTT TTTACCTGCT GTACTGTTGG CAACACGGTG GTTGGGAAAT GGTCACACTC GGCGGGTTGG GGCTTTACTT CATCTTGTTT ATCCTTGGTT GGCGCTTAAG CCGACAAAAT AAACAAACGC CACAGGGCAG TCAGGCTTTG GCCAGCCCTT CGGCCTAA
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Protein sequence | MIELHSPQYL KVTFALAFGS FLVFCNLYLF QPMLPYLANH FAVSETQINW LFAASTLALS LCLVPWAVTS EAVGRRLVML TGLFAMPVIG LAMLYAEQFW FLVLTRALMG VALAAFASVA VAYMVEELSP QAFGKAIGGY IAANSLGGIT GRIAGGLLTD ALGWQHAVVA MAIFTLLGAL LVAYLLPIQQ HFKPQRGLFF HHNRALVKHL QNRTLWLAML IGGVNFALFV NLYSVMGFRL VAEPYSLPIG IASLIFVCYL AGTLSSKLTA NWNRRFSAIP GMMLGALISM AGMLIALIEA IPAMLVGLIL ISFGAFFTHT LAYAWVSQKA TQAKATATAL YLVHYYIGGS LGGFYLLYCW QHGGWEMVTL GGLGLYFILF ILGWRLSRQN KQTPQGSQAL ASPSA
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