Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1175 |
Symbol | qxtA |
ID | 5136408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1235964 |
End bp | 1237301 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640532633 |
Product | quinol oxidase, subunit I |
Protein accession | YP_001217121 |
Protein GI | 147675651 |
COG category | [C] Energy production and conversion |
COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.868577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAGATA CCCTCATGCT GTCGCGGATC CAATTCGCTG CCAATATCAG CTTTCATATA CTGTTTCCCA CCATCACCAT TGCGTTGGGC TGGATATTGG TGTTTTTCAA ATGGCGTTAT TTACGAACAC AAGTCAGTGA ATGGCTCGAT CTCTACTATT TCTGGGTAAA AGTGTTTGCG CTGACTTTTG CTCTTGGGGT GGTGTCGGGC ATTACCATGA GTTTTCAATT TGGCACTAAC TGGCCGGGCT TTATGGAGCG GGTGGGCAAT GTGGCAGGTC CCTTACTTGG CTATGAAGTG ATGACCGCCT TCTTTATGGA AGCGACGTTT CTTGGTGTGA TGCTGTTTGG CCGAGGGCGT GTACCCGAAT GGTTGCACAC ACTATCGACT GTGCTGGTGG CCGTGGGCAC AAGTTTATCT GCGTTTTGGA TTCTGGTGCT CAACAGTTGG ATGCACACTC CAGCCGGTTA TGAAGTGATT GATGGCGTGG TGCATGTCAC CAGTTGGAAG GAGGTGATTT TTAACCCCTC GATGCCATAT CGCTTAGCGC ATACTTTGCT GGCATCGGCA TTGACGGCAA GTTTTTTGAT TGCTGGGATC AGTGCTTATC AAGTGCTGCG TAATGCCAAA CATCAAGCCG CCAAAATGGG CTTAAAAGTG GCCGTGAGTG TGGCCGCGTT AGCGATTCCT GTACAGATCT TGGTGGGGGA TTTACACGGC CTCAACACCT TAGAACATCA ACCAGCGAAA ATTGCGGCGA TGGAGGGGGT ATGGCAGACC GAGCGCGGCG CACCGCTACT GCTGTTTGCT CTGCCAAATG AAGAGACTCG CAGCAATGAT TTTGCTCTTG GTATTCCGAA TTTGGCCAGC TTGATTTTAA CCCATGATAT GAACGGGGAA ATTGTTGGAC TTGATGCCTT CGCGCCAGAT CATCCCCCCG TCGCACCGCT GTTTTTTGGT TTTCGCGTCA TGGTGGGAGT AGGCGTACTG ATGCTGTTGG TCAGTTGGTT TGGCGCTTGG CATTTATGGC GTAACAAACC GCTGCCCAAG CCCTATATGT ATGCCTTAAT CGGCATGACC TTTTCGGGTT GGGTCGCCAC GATTGCGGGC TGGTATGTCA CGGAAATTGG TCGCCAGCCT TGGCTGGTGA GTGGCGTATT GCGAACCTCT GAAGCCGTGA CCCCCGTGGC CAGTAGCTCG GTTGGGATCT CGCTGACGCT TTATCTCATC ACTTATGTTG TATTGTTGGT CGCTTATGTT CACACCCTAT TTTACCTTGC GCGTAAAACA GGACACGCAC CGCAAGTTTC ACCAAGCTCT ACAAAGGCCG CGTTATGA
|
Protein sequence | MLDTLMLSRI QFAANISFHI LFPTITIALG WILVFFKWRY LRTQVSEWLD LYYFWVKVFA LTFALGVVSG ITMSFQFGTN WPGFMERVGN VAGPLLGYEV MTAFFMEATF LGVMLFGRGR VPEWLHTLST VLVAVGTSLS AFWILVLNSW MHTPAGYEVI DGVVHVTSWK EVIFNPSMPY RLAHTLLASA LTASFLIAGI SAYQVLRNAK HQAAKMGLKV AVSVAALAIP VQILVGDLHG LNTLEHQPAK IAAMEGVWQT ERGAPLLLFA LPNEETRSND FALGIPNLAS LILTHDMNGE IVGLDAFAPD HPPVAPLFFG FRVMVGVGVL MLLVSWFGAW HLWRNKPLPK PYMYALIGMT FSGWVATIAG WYVTEIGRQP WLVSGVLRTS EAVTPVASSS VGISLTLYLI TYVVLLVAYV HTLFYLARKT GHAPQVSPSS TKAAL
|
| |