Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1166 |
Symbol | perA |
ID | 5135666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1224739 |
End bp | 1226913 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640532624 |
Product | catalase/peroxidase |
Protein accession | YP_001217112 |
Protein GI | 147674207 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0376] Catalase (peroxidase I) |
TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.801479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCACA ATAAAGCGGG TTCAAGCGGT CAATGCCCTG TCATGCACGG TGGCTTGACT TCGGCGAGCA TGTCCAACAT GGACTGGTGG CCTAAAGCGC TAAACTTAGA CATCCTTCAT CAGCATGACA GCAAAACCAA TCCACTTGGT GCTGATTTCA ACTATCGCGA AGAGCTGAAA AAGCTTGATG TAGAAGCGCT AAAACGCGAT CTGAAAGCGT TAATGACCAA TAGCCAAGAG TGGTGGCCGG CCGACTGGGG ACATTACGGC GGTTTGATGA TTCGTATGGC ATGGCACTCT GCGGGTACCT ACCGTATTGC CGATGGTCGT GGCGGCGGCG GTACCGGTAA CCAACGTTTT GCCCCACTGA ACTCATGGCC TGATAACGCC AACTTAGATA AAGCACGCCG TTTGCTGTGG CCTATCAAAC AAAAGTACGG TAACAAAATC AGCTGGGCGG ATTTGATGAT CCTCGCGGGG AACATGGCTT ATGAATCGAT GGGCCTCAAA ACCTTTGGTT TTGCCTTTGG CCGCGAAGAC ATCTGGCACC CAGAAAAAGA CATTTACTGG GGTTCTGAAA AAGAGTGGCT TGCCAAATCT GGCGGTGAAA ATAGCCGTTA CTCTGGTCAG CGCGATCTCG AAAACCCACT TGCGACCGTC ATGATGGGGC TTATCTACGT CAACCCAGAA GGTGTGGATG GAAACCCAGA TCCACTCAAA ACGGCGCAAG ACATGCGTGT CACTTTTGCT CGCATGGCAA TGAATGACGA AGAGACCGTT GCTCTGACGG CTGGCGGCCA TACGGTGGGT AAAGCGCACG GTAATGGCAA AGCTTCTAAC CTTGGCCCTG ATCCTGAAGG CGCTGAACTG CACGAACAAG GCTTAGGTTG GAACAACCAC ACCAGCCGTG GGATTGGTCG AAACACCGTC ACCAGTGGTA TTGAAGGTGC ATGGACCACT CACCCAACCC GTTGGGATAA CGAATATTTC TACTTACTGC TCAGCTATGA ATGGCAGCTC ACTAAGAGCC CTGCAGGTGC ATGGCAATGG GAACCTGTCA ACATCAAAGA GGAAGATAAA CCGGTTGATG TGGAAGACCC AAGTATTCGC TACAACCCAA TGATGACCGA TGCCGATATG GCTCTGAAAA TCGATCCTGA ATATCGCAAG ATTTCAGAGC GCTTCTACAA AGATCCCGCT TACTTCTCAG AAGTGTTTGC GCGAGCTTGG TTTAAGCTCA CTCACCGCGA TATGGGACCA AAAGCGCGCT ACTTTGGCCC AGATGTTCCG GCAGAAGATT TGATCTGGCA AGACCCTGTT CCAGCAGGTC GTAAAGATTA TGATGTCAAT GCGGTCAAAG CAAAAATCGC GGCAAGCGGT CTAAGCATCA GTGAAATGGT CAGCACCGCT TGGGATAGCG CTCGTACTTT CCGTGGTTCT GATAAACGTG GGGGAGCCAA CGGGGCGCGT ATTCGCCTCG CTCCACAAAA AGATTGGGAA GGCAACGAAC CTGCGCGTCT TGGTAAAGTT CTGGCGGTAT TAGAGAAAAT TGCCGCTGAA TCTGGCATCA GTATCGCCGA TACGATTGTT CTGGCTGGTA ACGTAGGTAT CGAACAAGCG GCTAAAGCCG CGGGCGTGAA TGTGACCGTA CCGTTCGCAC CGGGACGCGG CGATGCGACA ATCGAACAAA CCGATGTTGA GTCCTTTGAA GTGCTTGAGC CTCTCGCGGA TGGCTTCCGT AACTGGCAGA AAAAGCATTA TGTGGTCACA CCGGAAGAAA TGTTGCTCGA CAAAGCGCAA CTGCTGCGCC TCACCGCTCC AGAAATGACG GTGTTAATTG GTGGCATGCG TGTGCTTGGC ACTAACTACG GTGGCAGCCA ACACGGCGTG TTTACCGACC GCGTGGGTGC GTTGACCAAC GATTTCTTCG TTAACCTCAC CGACATGAGT TACACCTGGA AACCAACTGG TCGCAACTCT TACGAGATTG TTGAACGTAA GAGCGGCAAA GTGAAGTGGA CAGCCACTCG TGTTGATCTG GTGTTTGGTT CTAACTCCAT CCTACGTGCT TATGCGGAAG TGTACGCACA GGACGACAAC AAAGAAAAAT TCGTCAAAGA CTTTGTTGCC GCATGGACCA AAGTAATGAA TGCGGATCGA TTTGATCTGG TGTAA
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Protein sequence | MEHNKAGSSG QCPVMHGGLT SASMSNMDWW PKALNLDILH QHDSKTNPLG ADFNYREELK KLDVEALKRD LKALMTNSQE WWPADWGHYG GLMIRMAWHS AGTYRIADGR GGGGTGNQRF APLNSWPDNA NLDKARRLLW PIKQKYGNKI SWADLMILAG NMAYESMGLK TFGFAFGRED IWHPEKDIYW GSEKEWLAKS GGENSRYSGQ RDLENPLATV MMGLIYVNPE GVDGNPDPLK TAQDMRVTFA RMAMNDEETV ALTAGGHTVG KAHGNGKASN LGPDPEGAEL HEQGLGWNNH TSRGIGRNTV TSGIEGAWTT HPTRWDNEYF YLLLSYEWQL TKSPAGAWQW EPVNIKEEDK PVDVEDPSIR YNPMMTDADM ALKIDPEYRK ISERFYKDPA YFSEVFARAW FKLTHRDMGP KARYFGPDVP AEDLIWQDPV PAGRKDYDVN AVKAKIAASG LSISEMVSTA WDSARTFRGS DKRGGANGAR IRLAPQKDWE GNEPARLGKV LAVLEKIAAE SGISIADTIV LAGNVGIEQA AKAAGVNVTV PFAPGRGDAT IEQTDVESFE VLEPLADGFR NWQKKHYVVT PEEMLLDKAQ LLRLTAPEMT VLIGGMRVLG TNYGGSQHGV FTDRVGALTN DFFVNLTDMS YTWKPTGRNS YEIVERKSGK VKWTATRVDL VFGSNSILRA YAEVYAQDDN KEKFVKDFVA AWTKVMNADR FDLV
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