| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1156 |
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| Symbol | ugpA |
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| ID | 5136550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1216335 |
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| End bp | 1217216 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532614 |
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| Product | glycerol-3-phosphate ABC transporter, permease protein |
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| Protein accession | YP_001217102 |
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| Protein GI | 147673846 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAACGTC GACAACATTT CGCTCACACT CCGCTGCCCT ATTTGCTGCT TGCGCCGCAA
ATCGTGATCA TCGCGGTATT CTTTATTTAT CCTGCCGCAC AAGCGATTTA TCTCTCTTTT
ATGTTGGAAG ATCCTTGGGG GCTCTCCTCA ACTTTTGTTT GGTTTGAAAA CTATCAGGTA
CTGTTTAGCT CAACCGACTA TCTTGACTCA CTGGGCTTTA CTCTGCTGTT TTCGGTGATT
GTCTCTTTTC TTTCGCTGGC ACTTGCGCTG TTACTCGCGG TAAAAGCCGA CAACATCATT
CATGGCCAAG GTTCGTATCG CGTCACGCTA ACGTGGGTGT ATGCCGTTGC GCCTGCCGTC
GCGGGCATCA TTGGCGGTTT TCTGTTTAAT CCGCACATTG GTGTCCTGTC CGACTTTTTC
CAATACATCG GCTGGCAATT TAGCTTTCAG ACCGACCCTG TGGATGCGAC GATTGCGCTG
ATTTTGGTCT CAGTCTGGAA ACAGGTTTCG GTCAACTTCC TCTATTTTCT GGCCGGTTTG
CAGTCAATTT CCTACGCGGT ACGCGAAGCG GCGCTGCTCG ATTGCCAAAG CGACAGCAAA
CGTTTTTGGA GTATCACCTT TCCGCTGCTC GCCCCGACGG GATTTTTCCT GTTGGTGATC
AACCTCACTT ACGCTTTTTT CGACACTTTC GGCGTGATTG ACACCATGAC CAATGGCGGC
CCCGGCGGCA GTACCACCTC ACTGGTGTAT AAGGTGTATC GCGACGGTTT TGTTGGTGCA
GACCTTGGCG GCAGCTCGGC GCAATCGGTG GTGTTACTCG TGTTGGTGCT GGTGCTGACT
TGGTTGCAAT TCCGTTTTGT TGAAAAACGT GTTCATTACT AA
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| Protein sequence | MQRRQHFAHT PLPYLLLAPQ IVIIAVFFIY PAAQAIYLSF MLEDPWGLSS TFVWFENYQV
LFSSTDYLDS LGFTLLFSVI VSFLSLALAL LLAVKADNII HGQGSYRVTL TWVYAVAPAV
AGIIGGFLFN PHIGVLSDFF QYIGWQFSFQ TDPVDATIAL ILVSVWKQVS VNFLYFLAGL
QSISYAVREA ALLDCQSDSK RFWSITFPLL APTGFFLLVI NLTYAFFDTF GVIDTMTNGG
PGGSTTSLVY KVYRDGFVGA DLGGSSAQSV VLLVLVLVLT WLQFRFVEKR VHY
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