| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1148 |
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| Symbol | ligA-2 |
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| ID | 5136188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1208605 |
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| End bp | 1209453 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532606 |
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| Product | DNA ligase |
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| Protein accession | YP_001217094 |
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| Protein GI | 147674166 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.269751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTATAC GACTGACGCT CACCGCTGCC GCGATCATGC TGGCCCAGCA AACGCTGGCC
AATGATGGGC CGCTGGCTTT TATTCCAATT ACTTACGCCA ACAACTACCA ACACGGCATT
GATATTTTCG ATTACTGGAA AAGTGAGAAG CTTGACGGTA TCCGCGCGAT TTGGACGGGG
AAACAACTGG TCACTCGTAA CGGTAACCCT ATTGCTGCCC CCGCTTGGTT TACCGAGTCG
TTACCCTCTT ATTCACTCGA AGGTGAATTG TGGGCAGGGC GCGGCAATTT CTCACTGGTA
CAGCAAACGG TTTTAGATAG CCAACCGGCT GACTCCGCAT GGCGCAAAAT CAGCCTAATG
CTGTTCGATA TGCCTGATGC GGCGGGCGAT TACAGTAAGC GCTATTACAA CCTCATCCAT
TTGGTGAATA GCCTTGATCT CAAGCATATC CGATATGTCG AACACACCCC GATAAAATCT
GAGGCGGAAC TGCTTTCCTA CCTTGATAAC ATCAGTGAGA AATCGGGGGA AGGGGTAATG
CTGCGCAAAA TCAGCGCTCG CTATCAGGCA GGGCGAAGTA ATGATTTGTT GAAGCTGAAA
AGGCATCAGG ATGCAGAAGC AACCGTGATT GGTTATCGGC TCGGCATGGG AAAATACAAA
GGTAAAATGG GCTCTATGCT GGTTCGGACC GCAGAGGGGC TAGAATTTTA TATCGGCAGT
GGATTTAGTG ATGTCGAGCG CGCCGAGCCG CCCAAGATTG GTAGTGTTAT CACCTACCGT
TACAACGGAC TTACAACGGA AGGCAAACCA AGGTTTGCCC GTTTTGTTCG GGTCAGAGAA
AACTATTGA
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| Protein sequence | MLIRLTLTAA AIMLAQQTLA NDGPLAFIPI TYANNYQHGI DIFDYWKSEK LDGIRAIWTG
KQLVTRNGNP IAAPAWFTES LPSYSLEGEL WAGRGNFSLV QQTVLDSQPA DSAWRKISLM
LFDMPDAAGD YSKRYYNLIH LVNSLDLKHI RYVEHTPIKS EAELLSYLDN ISEKSGEGVM
LRKISARYQA GRSNDLLKLK RHQDAEATVI GYRLGMGKYK GKMGSMLVRT AEGLEFYIGS
GFSDVERAEP PKIGSVITYR YNGLTTEGKP RFARFVRVRE NY
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