Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1143 |
Symbol | |
ID | 5137044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1203696 |
End bp | 1204127 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640532601 |
Product | hypothetical protein |
Protein accession | YP_001217089 |
Protein GI | 147675224 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00345292 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCATCTG TGAAAATGGC TATTCATGTC TTAGTATTAA ACAAGATACA AACTAACTGG CGAACAGCAG CAGTAAAGCG GAGAAAGAAT GTGGTTGTAG AAACCGATGG ATATCTGGCC CTGATTGAAC ATCTGTCATT CAATATGGAT GTTTTCACTC AGGAAGGGGA TACGGGAACT GAAAGTGTTG AAGATGTCAT CACAGATATG GTGGCAAGCA ACATCATGTC TATTTTTGAA CAAAACCCTG AGCTTCATTC TAGTGTTCGC TTCCAATTAC TGAAAGAAGC CGATTCGGTG GTCGAAGACT TAGGCGAAGT GTTAGCGGGG GTTTGGTATC GCCCCGCGAC TAATGAGCAG ATCGCCTTTT TGGATGAATA CATCGCCCTA GTGAAAAACT TGTTTGACTC AGCCGTTGCG AAATACGACT AA
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Protein sequence | MPSVKMAIHV LVLNKIQTNW RTAAVKRRKN VVVETDGYLA LIEHLSFNMD VFTQEGDTGT ESVEDVITDM VASNIMSIFE QNPELHSSVR FQLLKEADSV VEDLGEVLAG VWYRPATNEQ IAFLDEYIAL VKNLFDSAVA KYD
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