| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1090 |
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| Symbol | |
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| ID | 5136190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1140250 |
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| End bp | 1142046 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640532548 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217036 |
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| Protein GI | 147675072 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTATACA GTGACAGCGT AACCCACTGT CTGCAGACTT GCAATTCTCC CTATCAAAAA
AGCGAGAAAG ATCATCGTCG ACTTTCACTG TTCGCTGCTC GGCTTTTTCT ATATAATTTG
GCTCTTTTCA ATCAGTTCGA TATCTCAATG ACCCAAAGCA TCTGGCGCAG TGTAACGCCT
CAATTTGAGC AGTTTAACAA AGTCTTTGAA AACTACCCTA ACCTAGCTCC CATTTCACTG
ATCGAGATTC AGCCTCGTTT AACCAGTGCG CTTGAACAGT TTGTTCACCT TAAAGGGTTT
AGTCGAATCC TCTTGATTAA TGCTCCCGAT AACTCGATTT ATCGCTCTCT CTTTAAAGAC
GCATTACTTG AGCAGGATCT TGATGTTCCT GTCGTGAGTA CAGAGACGTT AGATATTTCA
GAGATTCTAG GCCAAGTCAA AGTTGAGCAT GGTGGTCTAG TTCATAAAAC GTCAGGATAT
CTCGAACAAG CGAATGGCGG TTATTTGATT GTTTCAGCGA ATTTATTGCT GGCTAATCCA
CGCTATTGGC CAACAGTAAA AGCCGCCGTT TTGGGTGAAA CTGTCTCTCC TATCAATTGC
GATCCAAAAT CTCCGCTCCC TAATCGCTTA GGTTCAAGTT ACGACGTTAA ACTTATTGTT
GTCGGTGATC GCACGCAGCT TGGCGATCTG GATTTTTTAG ATGCTGATAT TCATTCCGGC
TTATGTTTGT TTTCAGAGCT TGAATTAGAT CTCAAGATAG AAGAAGAAAC GATTGAAGAC
TACCTCGGCT ACTTACGCTG GTTGTGTGAA CAGTACAATT TGCCTTCATT AACCTGCTCT
GCCATCCAGT CTCTGATGAC GGCCGGTGCT CGTTATACTG AAGATCAACA TTACGCTCCC
CTTTGTTTAA TGTGGCATCG AGCGCTACTT GAAGAAGCTC GCCTTGAATC TGAAGAGCCG
TTGATTGACG CTGAACATAT TGAAATTGCT TTAGATAAAC GCTATCTGCG CGAGTCTTAT
TTACCCGAAA GAGCTCTAGA CGACATTCTT GACGGTCAAG TGATCATCGA AACCCAGGGT
GAACAAGTCG GGCAAGTTAA TGGCTTGACA GTCATCGAAG TCACTGGGCA CCCAATGCCT
TACGGTGAGC CAGCTCGAAT TTCCTGTGTG ATCCATTTTG GTGATGGTGA CATTGCGGAT
GTAGAGAGAA AAGTTGAGTT AGGCGGCAAC CTTCATGCTA AAGGTATGAT GATTATGCAA
GCTTTTGTGA GTAGTGCCTT GAATCTTGAT GGTTCTCTGC CCTTTTCTGC TTCGATTGTT
TTTGAGCAGT CTTATAGTGA AGTTGATGGT GATAGCGCTT CACTGGCGGA ATTATGTTCA
TTAGTGAGTG CGCTTTCTGA GTATCCGATT GACCAACAGA TTGCCGTTAC TGGCGCTGTT
GACCAATTTG GACGAGTTCA AGCGGTCGGT GGTCTGAATG AAAAAATTGA AGGATTTTAT
CGCGTCTGTT GTCACCAAGG CTTAACTGGA GAACAGGGGG TGATTTTGCC AAGTTCGAAC
CTGAAACACT TGGCGCTTCA TAAATCAGTA GTAGAAAGCA TTAAGAATGG TGAATTCAAC
ATCTGGCCTG TTTCGACGGT GGATGAAGCG ATTCCTCTTC TCATGGGTAA ACCTTTCCGT
GGAGAAGATG AAGACAGCGT GATCGCAAAG ATCGCTGAAA GAATTGATAA TTTTGAAAAA
CTTGTGCAAC CGCACGGAAT TGTGGAACGG ATCAAAAACT GGCTTAGCTG GCACTGA
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| Protein sequence | MLYSDSVTHC LQTCNSPYQK SEKDHRRLSL FAARLFLYNL ALFNQFDISM TQSIWRSVTP
QFEQFNKVFE NYPNLAPISL IEIQPRLTSA LEQFVHLKGF SRILLINAPD NSIYRSLFKD
ALLEQDLDVP VVSTETLDIS EILGQVKVEH GGLVHKTSGY LEQANGGYLI VSANLLLANP
RYWPTVKAAV LGETVSPINC DPKSPLPNRL GSSYDVKLIV VGDRTQLGDL DFLDADIHSG
LCLFSELELD LKIEEETIED YLGYLRWLCE QYNLPSLTCS AIQSLMTAGA RYTEDQHYAP
LCLMWHRALL EEARLESEEP LIDAEHIEIA LDKRYLRESY LPERALDDIL DGQVIIETQG
EQVGQVNGLT VIEVTGHPMP YGEPARISCV IHFGDGDIAD VERKVELGGN LHAKGMMIMQ
AFVSSALNLD GSLPFSASIV FEQSYSEVDG DSASLAELCS LVSALSEYPI DQQIAVTGAV
DQFGRVQAVG GLNEKIEGFY RVCCHQGLTG EQGVILPSSN LKHLALHKSV VESIKNGEFN
IWPVSTVDEA IPLLMGKPFR GEDEDSVIAK IAERIDNFEK LVQPHGIVER IKNWLSWH
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