| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1053 |
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| Symbol | ccoN |
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| ID | 5136638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1096543 |
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| End bp | 1097976 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532511 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_001216999 |
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| Protein GI | 147673393 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0569715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATGA GCCAAGAAAA GCAGCTTGAA CAAAACTACA ACTATACCGT GGTCCGCCAA
TTTACCCTGG TAACAATTCT CTGGGGTATC GTCGGTATGG CTGTAGGGGT TTTGATTGCC
GCTCAATTAG TTTGGCCACA GCTAAACTTT GATACGCCGT GGTTGACGTA CAGTCGCTTA
CGTCCTCTGC ATACTAATGC GGTAATTTTT GCGTTTGGTA CAAGTGCCCT GTTTGCAACA
TCATATTATG TTGTGCAGCG TACTTGCCAA ACTCGTCTGT TCGGTGGACC GTTAGTTCCC
TTTACCTTTT GGGGATGGCA AGCGATTATC GTTGCCGCTG CAATCACCTT ACCTTTGGGT
TACACCTCAG GTAAAGAGTA CGCAGAACTG GAATGGCCAA TCGACATCGC CATCGCAGCG
GTTTGGGTCG CTTATGCGGT TGTGTTCTTT GGAACCCTAG TAAAACGTAA AACATCTCAT
ATTTACGTGG CTAACTGGTT CTTCGGTGCC TTTATTATTA CCGTTGCGGT ATTGCACATT
GTAAACAGTA TGGCGCTCCC CGTTTCGATG GGTAAGTCTT ACTCTATCTA CGCTGGTGCC
GTCGATGCCA TGGTGCAATG GTGGTATGGT CACAACGCTG TAGGTTTCCT GCTCACGGCC
GGCTTCCTAG GCATGATGTA CTACTTTGTT CCTAAACAAG CTGAACGCCC AGTCTACTCT
TACCGTCTGT CTATCGTTCA CTTTTGGGCT CTGATTTCTC TCTATATTTG GGCAGGTCCG
CACCATTTGC ATTACACCGC ACTACCTGAC TGGACTCAGT CTTTGGGCAT GGTAATGTCT
CTCGTGCTGT TCGCACCCTC TTGGGGGGGG ATGATCAACG GTATCATGAC TCTTTCTGGT
GCATGGCATA AGCTGCGCTA TGATCCAATT CTTCGTTTCT TGATCGTTTC TCTGTCTTTC
TACGGCATGT CTACGTTTGA AGGCCCGATG ATGTCAATCA AGACCGTCAA TGCTCTATCC
CACTACACCG ACTGGACGAT TGGTCACGTT CACTCTGGTG CGCTTGGTTG GGTAGCAATG
GTGTCGATTG GTTCTGTTTA CCATCTTATC CCACGTCTTT TTGGACAAGA ACGCATGTAC
TCTGTCAGTC TGATCAACGC TCACTTCTGG TTAGCCACGA TTGGTACAGT TCTGTACATC
GTTGCAATGT GGATCTCTGG CGTAATGCAA GGTTTGATGT GGCGTGCAGT GAACTCTGAC
GGCACACTGA CATACAGCTT TGTCGAGTCA GTGCAAGCGT CATATCCGTT CTATACCGTG
CGTTTCATCG GTGGTTTCAT CTTCTTGTCT GGGATGTTCC TGATGGCTTA CAACGCCTAT
AAGACCATTT CTGCACCTAA AAATAGCCTA AAAGCTATTG TGCAACCGGC ATAA
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| Protein sequence | MQMSQEKQLE QNYNYTVVRQ FTLVTILWGI VGMAVGVLIA AQLVWPQLNF DTPWLTYSRL
RPLHTNAVIF AFGTSALFAT SYYVVQRTCQ TRLFGGPLVP FTFWGWQAII VAAAITLPLG
YTSGKEYAEL EWPIDIAIAA VWVAYAVVFF GTLVKRKTSH IYVANWFFGA FIITVAVLHI
VNSMALPVSM GKSYSIYAGA VDAMVQWWYG HNAVGFLLTA GFLGMMYYFV PKQAERPVYS
YRLSIVHFWA LISLYIWAGP HHLHYTALPD WTQSLGMVMS LVLFAPSWGG MINGIMTLSG
AWHKLRYDPI LRFLIVSLSF YGMSTFEGPM MSIKTVNALS HYTDWTIGHV HSGALGWVAM
VSIGSVYHLI PRLFGQERMY SVSLINAHFW LATIGTVLYI VAMWISGVMQ GLMWRAVNSD
GTLTYSFVES VQASYPFYTV RFIGGFIFLS GMFLMAYNAY KTISAPKNSL KAIVQPA
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