Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1045 |
Symbol | fnr |
ID | 5137220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1090132 |
End bp | 1090884 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640532503 |
Product | fumarate/nitrate reduction transcriptional regulator |
Protein accession | YP_001216991 |
Protein GI | 147674177 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.18077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCTG AAAAGCCTGC TGCGAAGCGC ATTCAATCGG GTGGTTGTGC TATTCACTGT CAAGATTGCA GTATTAGCCA ACTCTGTATC CCTTTTACCT TGAATGAGTC TGAGCTTGAT CAGCTTGACC AGATCATTGA GCGTAAAAAA CCGATCCAGA AAGGTCAGGA GCTGTTTAAA GCGGGTGACG AACTGAGATC TTTATACGCA ATTCGTTCTG GTACGATTAA AAGCTACACC ATCACTGAGC AAGGTGATGA GCAGATCACA GCCTTTCATC TGGCTGGTGA TTTAGTTGGT TTTGATGCAA TTACTGGAGA TCAGCACCCA AGCTTTGCTC AAGCGCTTGA GACCTCCATG GTTTGTGAAA TCCCGTATGA AATCTTGGAT GACCTGTCTG GCAAAATGCC GAAACTGCGT CAACAAATCA TGCGTTTAAT GAGTAACGAA ATTAAAGGCG ATCAGGAGAT GATCCTGCTG CTTTCAAAGA AGAACGCTGA AGAACGTTTA GCGGCCTTCT TGTACAACCT TTCTACTCGT TTCTCTCAAC GCGGTTTCAG CCCAAGAGAG TTTCGTCTCA CCATGACACG TGGTGATATT GGTAACTACC TTGGTCTTAC TGTTGAAACC ATCAGCCGCT TGCTCGGTCG TTTCCAAAAA TCAGAAATCC TAAGTGTTAA AGGCAAATAC ATCACTATTC TCAACCATGC AGAATTGATG GAATTGGCTG GCGTCTCTAA AGAATCTAAA TAA
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Protein sequence | MISEKPAAKR IQSGGCAIHC QDCSISQLCI PFTLNESELD QLDQIIERKK PIQKGQELFK AGDELRSLYA IRSGTIKSYT ITEQGDEQIT AFHLAGDLVG FDAITGDQHP SFAQALETSM VCEIPYEILD DLSGKMPKLR QQIMRLMSNE IKGDQEMILL LSKKNAEERL AAFLYNLSTR FSQRGFSPRE FRLTMTRGDI GNYLGLTVET ISRLLGRFQK SEILSVKGKY ITILNHAELM ELAGVSKESK
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