| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1032 |
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| Symbol | |
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| ID | 5136995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1077378 |
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| End bp | 1078748 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532490 |
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| Product | sodium/alanine symporter |
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| Protein accession | YP_001216978 |
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| Protein GI | 147673881 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.065178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACC TGCAATCTTT TCTGCAAACT GTTGATAGTT TAGTGTGGGG GCCACCACTG
TTAATTCTTC TGGTCGGCAC CGGTGTCTAT TTCACCTTCC GCTTAGGCTT ACTGCAGTTT
CGACGCCTAC CGACGGCTTT AGCTATGGTA TTTGGCCGCG AAAAATCTTC AGACAAACAA
GGTGATGTAT CAAGCTTCGC CGCATTGTGT ACTACTCTTT CTGCCACCAT TGGTACTGGA
AACATCGTAG GTGTTGCGAC CGCAATCAAA CTCGGCGGCC CAGGTGCCCT GTTCTGGATG
TGGCTCGCCG CCCTGTTTGG TATGGCAACC AAATACGCAG AATGCTTACT CGCGGTGAAA
TATCGCCAAG TGGATGACAA AGGACAAATG GTCGGCGGGC CAATGTACTA CCTGCGTGAT
GGTGTGGGTT CAAAAACACT GGCAGTATTA TTTGCTGTGT TTGCCGTAGG GGTTGCCTGC
TTCGGGATTG GTACTTTCCC GCAGGTGAAC GCGATCTTAG ATGCCACTCA AATCTCTTTT
GGCGTCCCTC GTGAAGCCTC TGCAGTGGTA CTGACCGTAC TGGTTGCGAT TGTCACTATC
GGTGGTATTC AATCCATCGC TAAAGTCGCA GGAAAAGTGG TTCCTGCGAT GGCGCTGTTT
TACATTGTCG CCTGCTTAAG TGTGATTGTT ACCAATGCAG ACAAACTCGC AGACGCCGTG
GAATTGGTGC TGGTATCCGC TTTCACCTCG ACTGCTGCGA CAGGTGGCTT CTTAGGTGCG
AGCATTATGC TCGCGATTCA ATCGGGTATT GCCCGCGGCG TGTTCTCCAA TGAATCTGGC
TTAGGCAGTG CGCCTATGGC GGCGGCGAAA ACTGACTCCT GCGTTGAGCA AGGTCTTATC
TCTATGACGG GGACTTTCTT TGACACCATT ATCATCTGTA CGATGACTGG CTTGGCTCTC
ATTCTAACGG GCGCTTGGCA AAGCGACCTT TCCGGTGCTG CGATGACCAC CTACGCCTTT
GCCACAGGCT TAAATGCACA AACTATCGGC CCGATGCTGG TTTCGATTGG TTTGATGTTC
TTTGCCTTTA CGACCATTCT GGGTTGGAAC TACTACGGCG AACGCTGCAT GGTGTTCTTA
TTCGGAACCA AAGCGGTATT GCCTTATAAA ATCGTCTTTA TTGGTTTGAT TGCCTCAGGC
GCATTCCTAC ACCTCGATTT GATTTGGATT ATCGCCGACA TTGTAAATGG TTTAATGGCC
ATTCCGAACC TTATTGGCCT TGCTGCCTTA CGCCATGTGG TCGTAGAAGA AACGAAGCAA
TATTTTGCCG CGCGTTATCA ATACTCCGAA GCCGAAGCCC AAGTTCAATA A
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| Protein sequence | MNNLQSFLQT VDSLVWGPPL LILLVGTGVY FTFRLGLLQF RRLPTALAMV FGREKSSDKQ
GDVSSFAALC TTLSATIGTG NIVGVATAIK LGGPGALFWM WLAALFGMAT KYAECLLAVK
YRQVDDKGQM VGGPMYYLRD GVGSKTLAVL FAVFAVGVAC FGIGTFPQVN AILDATQISF
GVPREASAVV LTVLVAIVTI GGIQSIAKVA GKVVPAMALF YIVACLSVIV TNADKLADAV
ELVLVSAFTS TAATGGFLGA SIMLAIQSGI ARGVFSNESG LGSAPMAAAK TDSCVEQGLI
SMTGTFFDTI IICTMTGLAL ILTGAWQSDL SGAAMTTYAF ATGLNAQTIG PMLVSIGLMF
FAFTTILGWN YYGERCMVFL FGTKAVLPYK IVFIGLIASG AFLHLDLIWI IADIVNGLMA
IPNLIGLAAL RHVVVEETKQ YFAARYQYSE AEAQVQ
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